Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RN7SKP156-201ENST00000410308 342 ntBASIC3.47□□□□□ -1.85
GFRA1P56159 AIMP1P2-201ENST00000425294 312 ntBASIC3.47□□□□□ -1.85
GFRA1P56159 AL445584.1-201ENST00000431451 330 ntBASIC3.47□□□□□ -1.85
GFRA1P56159 UQCRBP2-201ENST00000447827 297 ntBASIC3.47□□□□□ -1.85
GFRA1P56159 HSPE1P25-201ENST00000455484 251 ntBASIC3.47□□□□□ -1.85
GFRA1P56159 RPS26P15-201ENST00000488067 348 ntBASIC3.47□□□□□ -1.85
GFRA1P56159 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.47□□□□□ -1.85
GFRA1P56159 RNA5SP164-201ENST00000516533 110 ntBASIC3.47□□□□□ -1.85
GFRA1P56159 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.47□□□□□ -1.85
GFRA1P56159 RNU1-30P-201ENST00000606575 163 ntBASIC3.47□□□□□ -1.85
GFRA1P56159 MAPK10-372ENST00000641954 3413 ntBASIC3.47□□□□□ -1.85
GFRA1P56159 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
GFRA1P56159 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.47□□□□□ -1.85
GFRA1P56159 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
GFRA1P56159 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
GFRA1P56159 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
GFRA1P56159 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.47□□□□□ -1.85
GFRA1P56159 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.47□□□□□ -1.85
GFRA1P56159 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
GFRA1P56159 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
GFRA1P56159 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.46□□□□□ -1.86
GFRA1P56159 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.46□□□□□ -1.86
GFRA1P56159 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
GFRA1P56159 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
GFRA1P56159 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
GFRA1P56159 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
GFRA1P56159 AL161912.2-201ENST00000565707 3007 ntBASIC3.46□□□□□ -1.86
GFRA1P56159 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
GFRA1P56159 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
GFRA1P56159 RNU6-1266P-201ENST00000362794 105 ntBASIC3.46□□□□□ -1.86
GFRA1P56159 RNU6-799P-201ENST00000363567 107 ntBASIC3.46□□□□□ -1.86
GFRA1P56159 RNU6ATAC-201ENST00000408749 126 ntBASIC3.46□□□□□ -1.86
GFRA1P56159 RNU4-30P-201ENST00000410245 143 ntBASIC3.46□□□□□ -1.86
GFRA1P56159 SNORA57.3-201ENST00000411095 141 ntBASIC3.46□□□□□ -1.86
GFRA1P56159 HMGN2P31-201ENST00000432430 273 ntBASIC3.46□□□□□ -1.86
GFRA1P56159 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.46□□□□□ -1.86
GFRA1P56159 RPL7P47-201ENST00000497299 556 ntBASIC3.46□□□□□ -1.86
GFRA1P56159 SERF1AP1-201ENST00000514575 187 ntBASIC3.46□□□□□ -1.86
GFRA1P56159 SNORD59.2-201ENST00000516873 68 ntBASIC3.46□□□□□ -1.86
GFRA1P56159 RNU1-45P-201ENST00000517191 141 ntBASIC3.46□□□□□ -1.86
GFRA1P56159 AC027176.1-201ENST00000560204 514 ntBASIC3.46□□□□□ -1.86
GFRA1P56159 MIR4423-201ENST00000580922 80 ntBASIC3.46□□□□□ -1.86
GFRA1P56159 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.46□□□□□ -1.86
GFRA1P56159 AC005176.2-201ENST00000596933 147 ntBASIC3.46□□□□□ -1.86
GFRA1P56159 AC010900.2-201ENST00000604508 210 ntBASIC3.46□□□□□ -1.86
GFRA1P56159 BX284668.6-201ENST00000606899 438 ntBASIC3.46□□□□□ -1.86
GFRA1P56159 CR392039.5-201ENST00000623201 510 ntBASIC3.46□□□□□ -1.86
GFRA1P56159 ZNF962P-201ENST00000443465 3140 ntBASIC3.46□□□□□ -1.86
GFRA1P56159 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
GFRA1P56159 AL109809.4-201ENST00000603520 2185 ntBASIC3.46□□□□□ -1.86
GFRA1P56159 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.46□□□□□ -1.86
GFRA1P56159 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
GFRA1P56159 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
GFRA1P56159 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.46□□□□□ -1.86
GFRA1P56159 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
GFRA1P56159 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.45□□□□□ -1.86
GFRA1P56159 AC018555.1-201ENST00000567548 1980 ntBASIC3.45□□□□□ -1.86
GFRA1P56159 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
GFRA1P56159 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
GFRA1P56159 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
GFRA1P56159 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
GFRA1P56159 RNU6-961P-201ENST00000363893 105 ntBASIC3.45□□□□□ -1.86
GFRA1P56159 RNU6-378P-201ENST00000384324 107 ntBASIC3.45□□□□□ -1.86
GFRA1P56159 Y_RNA.570-201ENST00000384750 101 ntBASIC3.45□□□□□ -1.86
GFRA1P56159 MIR549A-201ENST00000385268 96 ntBASIC3.45□□□□□ -1.86
GFRA1P56159 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.45□□□□□ -1.86
GFRA1P56159 AL500522.2-201ENST00000448562 343 ntBASIC3.45□□□□□ -1.86
GFRA1P56159 AL139109.1-201ENST00000455491 297 ntBASIC3.45□□□□□ -1.86
GFRA1P56159 AL133162.1-201ENST00000463228 453 ntBASIC3.45□□□□□ -1.86
GFRA1P56159 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.45□□□□□ -1.86
GFRA1P56159 AL121594.1-201ENST00000475906 575 ntBASIC3.45□□□□□ -1.86
GFRA1P56159 RPS27P26-201ENST00000494583 239 ntBASIC3.45□□□□□ -1.86
GFRA1P56159 AC074133.1-201ENST00000515696 183 ntBASIC3.45□□□□□ -1.86
GFRA1P56159 AC023632.4-201ENST00000517783 191 ntBASIC3.45□□□□□ -1.86
GFRA1P56159 AC079598.5-201ENST00000547460 117 ntBASIC3.45□□□□□ -1.86
GFRA1P56159 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.45□□□□□ -1.86
GFRA1P56159 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.45□□□□□ -1.86
GFRA1P56159 AC026470.2-201ENST00000561492 181 ntBASIC3.45□□□□□ -1.86
GFRA1P56159 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.45□□□□□ -1.86
GFRA1P56159 PCGEM1.1-201ENST00000613431 131 ntBASIC3.45□□□□□ -1.86
GFRA1P56159 AC127459.3-201ENST00000624328 466 ntBASIC3.45□□□□□ -1.86
GFRA1P56159 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.45□□□□□ -1.86
GFRA1P56159 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.45□□□□□ -1.86
GFRA1P56159 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.45□□□□□ -1.86
GFRA1P56159 IPO8P1-201ENST00000455509 3109 ntBASIC3.45□□□□□ -1.86
GFRA1P56159 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.45□□□□□ -1.86
GFRA1P56159 AC099654.7-201ENST00000635788 2127 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
GFRA1P56159 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
GFRA1P56159 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
GFRA1P56159 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.44□□□□□ -1.86
GFRA1P56159 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
GFRA1P56159 RNU6-338P-201ENST00000383888 105 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 SNORA18.3-201ENST00000384122 132 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 U8.11-201ENST00000384699 133 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 U8.12-201ENST00000384701 133 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
GFRA1P56159 AL512633.1-201ENST00000399931 655 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 RNA5SP201-201ENST00000410316 124 ntBASIC3.44□□□□□ -1.86
GFRA1P56159 RN7SKP27-201ENST00000410684 333 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms