Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AL049779.4-201ENST00000604500 156 ntBASIC2.39□□□□□ -2.03
CDH11P55287 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.39□□□□□ -2.03
CDH11P55287 AL161423.1-201ENST00000613700 262 ntBASIC2.39□□□□□ -2.03
CDH11P55287 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.39□□□□□ -2.03
CDH11P55287 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.39□□□□□ -2.03
CDH11P55287 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.38□□□□□ -2.03
CDH11P55287 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CDH11P55287 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.38□□□□□ -2.03
CDH11P55287 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CDH11P55287 RNU6-527P-201ENST00000363425 104 ntBASIC2.38□□□□□ -2.03
CDH11P55287 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH11P55287 RNU1-138P-201ENST00000384093 164 ntBASIC2.38□□□□□ -2.03
CDH11P55287 MIR147B-201ENST00000390185 80 ntBASIC2.38□□□□□ -2.03
CDH11P55287 RNA5SP21-201ENST00000410917 96 ntBASIC2.38□□□□□ -2.03
CDH11P55287 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.38□□□□□ -2.03
CDH11P55287 AL591043.1-201ENST00000432461 424 ntBASIC2.38□□□□□ -2.03
CDH11P55287 MICF-203ENST00000432679 129 ntBASIC2.38□□□□□ -2.03
CDH11P55287 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.38□□□□□ -2.03
CDH11P55287 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.38□□□□□ -2.03
CDH11P55287 RPL9P9-202ENST00000466501 579 ntBASIC2.38□□□□□ -2.03
CDH11P55287 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH11P55287 AC079598.5-201ENST00000547460 117 ntBASIC2.38□□□□□ -2.03
CDH11P55287 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH11P55287 AP001836.1-201ENST00000604675 523 ntBASIC2.38□□□□□ -2.03
CDH11P55287 FO624990.1-201ENST00000636373 85 ntBASIC2.38□□□□□ -2.03
CDH11P55287 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.38□□□□□ -2.03
CDH11P55287 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.37□□□□□ -2.03
CDH11P55287 MIR6073-201ENST00000352083 89 ntBASIC2.37□□□□□ -2.03
CDH11P55287 MIR449A-201ENST00000362113 91 ntBASIC2.37□□□□□ -2.03
CDH11P55287 RNU6-1010P-201ENST00000362757 107 ntBASIC2.37□□□□□ -2.03
CDH11P55287 RNU6-1285P-201ENST00000363480 105 ntBASIC2.37□□□□□ -2.03
CDH11P55287 RNU6-1180P-201ENST00000364935 107 ntBASIC2.37□□□□□ -2.03
CDH11P55287 RNU6-1083P-201ENST00000384022 107 ntBASIC2.37□□□□□ -2.03
CDH11P55287 Y_RNA.529-201ENST00000384586 119 ntBASIC2.37□□□□□ -2.03
CDH11P55287 MIR9-1-201ENST00000385198 89 ntBASIC2.37□□□□□ -2.03
CDH11P55287 RNU2-52P-201ENST00000410680 190 ntBASIC2.37□□□□□ -2.03
CDH11P55287 AP000275.1-201ENST00000411943 390 ntBASIC2.37□□□□□ -2.03
CDH11P55287 AC022028.1-201ENST00000412054 408 ntBASIC2.37□□□□□ -2.03
CDH11P55287 AC074085.1-201ENST00000413598 418 ntBASIC2.37□□□□□ -2.03
CDH11P55287 NCOR1P3-201ENST00000420479 303 ntBASIC2.37□□□□□ -2.03
CDH11P55287 RPL23AP95-201ENST00000426806 265 ntBASIC2.37□□□□□ -2.03
CDH11P55287 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH11P55287 MTND4P17-201ENST00000470444 350 ntBASIC2.37□□□□□ -2.03
CDH11P55287 RPS27P27-201ENST00000498779 255 ntBASIC2.37□□□□□ -2.03
CDH11P55287 RNU6-612P-201ENST00000516909 102 ntBASIC2.37□□□□□ -2.03
CDH11P55287 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH11P55287 AC010186.2-204ENST00000537668 439 ntBASIC2.37□□□□□ -2.03
CDH11P55287 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.37□□□□□ -2.03
CDH11P55287 IMMP1LP2-201ENST00000552954 492 ntBASIC2.37□□□□□ -2.03
CDH11P55287 AC005668.1-201ENST00000571142 476 ntBASIC2.37□□□□□ -2.03
CDH11P55287 MIR5194-201ENST00000582634 120 ntBASIC2.37□□□□□ -2.03
CDH11P55287 FGF7P1-201ENST00000582820 288 ntBASIC2.37□□□□□ -2.03
CDH11P55287 MIR5092-201ENST00000583139 88 ntBASIC2.37□□□□□ -2.03
CDH11P55287 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH11P55287 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.37□□□□□ -2.03
CDH11P55287 AC098657.3-201ENST00000620434 263 ntBASIC2.37□□□□□ -2.03
CDH11P55287 MIR7515-201ENST00000637837 67 ntBASIC2.37□□□□□ -2.03
CDH11P55287 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDH11P55287 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.37□□□□□ -2.03
CDH11P55287 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.37□□□□□ -2.03
CDH11P55287 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.37□□□□□ -2.03
CDH11P55287 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDH11P55287 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
CDH11P55287 AC010329.5-201ENST00000623497 2174 ntBASIC2.36□□□□□ -2.03
CDH11P55287 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.36□□□□□ -2.03
CDH11P55287 Y_RNA.40-201ENST00000362645 93 ntBASIC2.36□□□□□ -2.03
CDH11P55287 RNU6-529P-201ENST00000363383 104 ntBASIC2.36□□□□□ -2.03
CDH11P55287 RNU1-112P-201ENST00000364401 164 ntBASIC2.36□□□□□ -2.03
CDH11P55287 RNU2-23P-201ENST00000410545 195 ntBASIC2.36□□□□□ -2.03
CDH11P55287 CYCSP48-201ENST00000417124 323 ntBASIC2.36□□□□□ -2.03
CDH11P55287 AL139396.1-201ENST00000421137 167 ntBASIC2.36□□□□□ -2.03
CDH11P55287 AC009296.1-201ENST00000443146 155 ntBASIC2.36□□□□□ -2.03
CDH11P55287 AC108938.1-201ENST00000451204 136 ntBASIC2.36□□□□□ -2.03
CDH11P55287 AL441985.1-201ENST00000457727 251 ntBASIC2.36□□□□□ -2.03
CDH11P55287 SNORD5.1-201ENST00000458800 75 ntBASIC2.36□□□□□ -2.03
CDH11P55287 AC018437.1-201ENST00000492214 406 ntBASIC2.36□□□□□ -2.03
CDH11P55287 AC116337.1-201ENST00000509680 687 ntBASIC2.36□□□□□ -2.03
CDH11P55287 RN7SKP24-201ENST00000515888 284 ntBASIC2.36□□□□□ -2.03
CDH11P55287 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.36□□□□□ -2.03
CDH11P55287 AC109329.1-201ENST00000518744 317 ntBASIC2.36□□□□□ -2.03
CDH11P55287 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.36□□□□□ -2.03
CDH11P55287 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.36□□□□□ -2.03
CDH11P55287 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.36□□□□□ -2.03
CDH11P55287 C8orf59P2-201ENST00000603441 271 ntBASIC2.36□□□□□ -2.03
CDH11P55287 Y_RNA.804-201ENST00000615262 101 ntBASIC2.36□□□□□ -2.03
CDH11P55287 AC024581.2-201ENST00000619986 252 ntBASIC2.36□□□□□ -2.03
CDH11P55287 AC092608.2-201ENST00000624427 218 ntBASIC2.36□□□□□ -2.03
CDH11P55287 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.36□□□□□ -2.03
CDH11P55287 AC112487.2-201ENST00000637950 304 ntBASIC2.36□□□□□ -2.03
CDH11P55287 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDH11P55287 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.36□□□□□ -2.03
CDH11P55287 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.36□□□□□ -2.03
CDH11P55287 AL359854.1-201ENST00000614203 1594 ntBASIC2.36□□□□□ -2.03
CDH11P55287 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDH11P55287 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.35□□□□□ -2.03
CDH11P55287 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDH11P55287 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDH11P55287 U8.8-201ENST00000365399 135 ntBASIC2.35□□□□□ -2.03
CDH11P55287 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CDH11P55287 RNU6-43P-201ENST00000384302 107 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms