Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AL391994.1-201ENST00000254724 282 ntBASIC0.34□□□□□ -2.36
GTF2A1P52655 SNORA4.2-201ENST00000365313 147 ntBASIC0.34□□□□□ -2.36
GTF2A1P52655 BTF3L4P1-201ENST00000413813 468 ntBASIC0.34□□□□□ -2.36
GTF2A1P52655 AL627311.1-201ENST00000431514 115 ntBASIC0.34□□□□□ -2.36
GTF2A1P52655 MTCO3P29-201ENST00000432119 779 ntBASIC0.34□□□□□ -2.36
GTF2A1P52655 EEF1E1P1-201ENST00000446998 430 ntBASIC0.34□□□□□ -2.36
GTF2A1P52655 ATP5J2P3-201ENST00000451550 258 ntBASIC0.34□□□□□ -2.36
GTF2A1P52655 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.34□□□□□ -2.36
GTF2A1P52655 AL122001.1-201ENST00000457027 370 ntBASIC0.34□□□□□ -2.36
GTF2A1P52655 SNRPFP3-201ENST00000457792 225 ntBASIC0.34□□□□□ -2.36
GTF2A1P52655 AC002350.1-201ENST00000490759 375 ntBASIC0.34□□□□□ -2.36
GTF2A1P52655 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.34□□□□□ -2.36
GTF2A1P52655 ATP5EP1-201ENST00000510257 156 ntBASIC0.34□□□□□ -2.36
GTF2A1P52655 RNU6-1053P-201ENST00000515930 101 ntBASIC0.34□□□□□ -2.36
GTF2A1P52655 RNU5F-2P-201ENST00000516066 82 ntBASIC0.34□□□□□ -2.36
GTF2A1P52655 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.34□□□□□ -2.36
GTF2A1P52655 VN1R87P-201ENST00000596706 487 ntBASIC0.34□□□□□ -2.36
GTF2A1P52655 AL158163.2-201ENST00000619110 700 ntBASIC0.34□□□□□ -2.36
GTF2A1P52655 OR4G1P-203ENST00000641984 1631 ntBASIC0.34□□□□□ -2.36
GTF2A1P52655 RNA5SP347-201ENST00000362445 119 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 SMIM11P1-201ENST00000369586 178 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 RNU6-945P-201ENST00000383947 107 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 SNORA50A-201ENST00000384225 134 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 SNORA12.2-201ENST00000391040 156 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 MIR1305-201ENST00000408300 86 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 MTCO3P41-201ENST00000414801 328 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 ARL5AP1-201ENST00000418991 388 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 USP9YP14-201ENST00000430663 563 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 AC092628.1-201ENST00000436250 252 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 MTCYBP42-201ENST00000444653 1130 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.33□□□□□ -2.36
GTF2A1P52655 ART2BP-201ENST00000453501 499 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 AL139824.2-201ENST00000458731 1095 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 AC048334.1-201ENST00000477975 159 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 SNORA43.2-201ENST00000516652 128 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 BNIP3P6-201ENST00000549284 499 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 AC018659.1-201ENST00000551083 169 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.33□□□□□ -2.36
GTF2A1P52655 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.33□□□□□ -2.36
GTF2A1P52655 AL512347.1-201ENST00000566420 503 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 MTATP6P3-201ENST00000581686 676 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.33□□□□□ -2.36
GTF2A1P52655 AC004987.4-201ENST00000603383 338 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 AC018889.1-201ENST00000605372 397 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 AP001596.2-201ENST00000608410 312 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 SCARNA4-202ENST00000625402 129 ntBASIC0.33□□□□□ -2.36
GTF2A1P52655 AL159152.1-201ENST00000635019 2587 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 OR4G2P-201ENST00000328113 903 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
GTF2A1P52655 MIR412-201ENST00000362142 91 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 RNU4-15P-201ENST00000362613 141 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 SNORD56.1-201ENST00000362913 68 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 RNU6-236P-201ENST00000363886 106 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 RNU5A-8P-201ENST00000364102 114 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 RNU1-96P-201ENST00000364163 162 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 MIR10A-201ENST00000385043 110 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 RNA5SP111-201ENST00000411386 101 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 MTCO1P17-201ENST00000411522 491 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 AC092809.3-201ENST00000415453 231 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 ELOCP9-201ENST00000418624 239 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 AL355994.1-201ENST00000424379 260 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.32□□□□□ -2.36
GTF2A1P52655 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.32□□□□□ -2.36
GTF2A1P52655 AC069257.2-201ENST00000441819 155 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 PAXBP1P1-201ENST00000449315 447 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 NDUFB1P2-201ENST00000449477 176 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 MTND2P3-201ENST00000452458 470 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.32□□□□□ -2.36
GTF2A1P52655 RPL39P38-201ENST00000467018 153 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 SNORD79.1-201ENST00000516069 84 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 RNA5SP255-201ENST00000516370 107 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 Y_RNA.687-201ENST00000516558 91 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.32□□□□□ -2.36
GTF2A1P52655 AL022154.1-201ENST00000604698 785 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 AL353765.1-201ENST00000605514 183 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 MIR15A-201ENST00000607334 83 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 AL359757.2-201ENST00000624309 274 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.32□□□□□ -2.36
GTF2A1P52655 MIR5087-201ENST00000635826 76 ntBASIC0.32□□□□□ -2.36
GTF2A1P52655 RNU6-1123P-201ENST00000362347 106 ntBASIC0.31□□□□□ -2.36
GTF2A1P52655 RNU6-969P-201ENST00000383900 105 ntBASIC0.31□□□□□ -2.36
GTF2A1P52655 RNU6-1054P-201ENST00000411293 104 ntBASIC0.31□□□□□ -2.36
GTF2A1P52655 MTCO1P21-201ENST00000416634 589 ntBASIC0.31□□□□□ -2.36
GTF2A1P52655 COX6CP10-201ENST00000416832 224 ntBASIC0.31□□□□□ -2.36
GTF2A1P52655 RPS3AP37-201ENST00000419176 745 ntBASIC0.31□□□□□ -2.36
GTF2A1P52655 AC073910.1-201ENST00000445047 438 ntBASIC0.31□□□□□ -2.36
GTF2A1P52655 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.31□□□□□ -2.36
GTF2A1P52655 AC119751.4-201ENST00000507498 357 ntBASIC0.31□□□□□ -2.36
GTF2A1P52655 RNU6-677P-201ENST00000516914 101 ntBASIC0.31□□□□□ -2.36
GTF2A1P52655 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.31□□□□□ -2.36
GTF2A1P52655 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.31□□□□□ -2.36
GTF2A1P52655 MIR4709-201ENST00000577272 72 ntBASIC0.31□□□□□ -2.36
GTF2A1P52655 MIR3146-201ENST00000580367 79 ntBASIC0.31□□□□□ -2.36
GTF2A1P52655 AL512605.2-201ENST00000592972 256 ntBASIC0.31□□□□□ -2.36
GTF2A1P52655 AC068620.3-201ENST00000602749 560 ntBASIC0.31□□□□□ -2.36
GTF2A1P52655 AL138889.2-201ENST00000603883 242 ntBASIC0.31□□□□□ -2.36
GTF2A1P52655 AC124016.2-201ENST00000610058 665 ntBASIC0.31□□□□□ -2.36
GTF2A1P52655 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
GTF2A1P52655 AC104985.3-201ENST00000623479 597 ntBASIC0.31□□□□□ -2.36
GTF2A1P52655 AC093875.1-201ENST00000623688 504 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms