Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.17□□□□□ -1.74
USP11P51784 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.17□□□□□ -1.74
USP11P51784 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.17□□□□□ -1.74
USP11P51784 RNU6-966P-201ENST00000516479 104 ntBASIC4.17□□□□□ -1.74
USP11P51784 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.17□□□□□ -1.74
USP11P51784 AC008011.1-201ENST00000545989 227 ntBASIC4.17□□□□□ -1.74
USP11P51784 AC055872.1-201ENST00000570978 278 ntBASIC4.17□□□□□ -1.74
USP11P51784 MIR5695-201ENST00000579717 85 ntBASIC4.17□□□□□ -1.74
USP11P51784 AC027309.3-201ENST00000623419 351 ntBASIC4.17□□□□□ -1.74
USP11P51784 SNORA43.4-201ENST00000629559 138 ntBASIC4.17□□□□□ -1.74
USP11P51784 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.17□□□□□ -1.74
USP11P51784 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
USP11P51784 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.17□□□□□ -1.74
USP11P51784 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP11P51784 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP11P51784 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP11P51784 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP11P51784 RNU6-600P-201ENST00000362524 99 ntBASIC4.16□□□□□ -1.74
USP11P51784 RNU6-942P-201ENST00000363002 107 ntBASIC4.16□□□□□ -1.74
USP11P51784 Y_RNA.272-201ENST00000364696 102 ntBASIC4.16□□□□□ -1.74
USP11P51784 SNORD32A-201ENST00000364805 84 ntBASIC4.16□□□□□ -1.74
USP11P51784 RNA5SP167-201ENST00000365461 116 ntBASIC4.16□□□□□ -1.74
USP11P51784 SNORD116-18-201ENST00000383961 92 ntBASIC4.16□□□□□ -1.74
USP11P51784 Y_RNA.497-201ENST00000384447 98 ntBASIC4.16□□□□□ -1.74
USP11P51784 RNU6-1154P-201ENST00000391001 104 ntBASIC4.16□□□□□ -1.74
USP11P51784 PTMAP5-201ENST00000393073 333 ntBASIC4.16□□□□□ -1.74
USP11P51784 U3.37-201ENST00000408528 213 ntBASIC4.16□□□□□ -1.74
USP11P51784 Y_RNA.597-201ENST00000410463 100 ntBASIC4.16□□□□□ -1.74
USP11P51784 RHEBP3-201ENST00000411920 351 ntBASIC4.16□□□□□ -1.74
USP11P51784 ATP5A1P2-201ENST00000412323 255 ntBASIC4.16□□□□□ -1.74
USP11P51784 RPL21P66-201ENST00000426566 466 ntBASIC4.16□□□□□ -1.74
USP11P51784 AL356867.1-201ENST00000429623 299 ntBASIC4.16□□□□□ -1.74
USP11P51784 AC007395.1-201ENST00000451333 677 ntBASIC4.16□□□□□ -1.74
USP11P51784 snoU13.22-201ENST00000459428 104 ntBASIC4.16□□□□□ -1.74
USP11P51784 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.16□□□□□ -1.74
USP11P51784 SNORA40.9-201ENST00000515895 93 ntBASIC4.16□□□□□ -1.74
USP11P51784 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.16□□□□□ -1.74
USP11P51784 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.16□□□□□ -1.74
USP11P51784 AC244205.2-202ENST00000635781 342 ntBASIC4.16□□□□□ -1.74
USP11P51784 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.16□□□□□ -1.74
USP11P51784 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP11P51784 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USP11P51784 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP11P51784 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP11P51784 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.16□□□□□ -1.74
USP11P51784 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
USP11P51784 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
USP11P51784 RNU6-653P-201ENST00000363074 106 ntBASIC4.15□□□□□ -1.75
USP11P51784 SNORA7.2-201ENST00000364446 145 ntBASIC4.15□□□□□ -1.75
USP11P51784 SNORA5A-201ENST00000384111 134 ntBASIC4.15□□□□□ -1.75
USP11P51784 SNORA46.1-201ENST00000391069 153 ntBASIC4.15□□□□□ -1.75
USP11P51784 RNU6-159P-201ENST00000391080 106 ntBASIC4.15□□□□□ -1.75
USP11P51784 EIF1AXP1-201ENST00000419267 435 ntBASIC4.15□□□□□ -1.75
USP11P51784 NDUFB1P1-201ENST00000435191 180 ntBASIC4.15□□□□□ -1.75
USP11P51784 POLR2KP2-201ENST00000438155 177 ntBASIC4.15□□□□□ -1.75
USP11P51784 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.15□□□□□ -1.75
USP11P51784 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
USP11P51784 IFNA11P-201ENST00000446352 526 ntBASIC4.15□□□□□ -1.75
USP11P51784 SNORD105B-201ENST00000458770 79 ntBASIC4.15□□□□□ -1.75
USP11P51784 AC078817.1-201ENST00000492623 435 ntBASIC4.15□□□□□ -1.75
USP11P51784 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.15□□□□□ -1.75
USP11P51784 RNU6-62P-201ENST00000516526 102 ntBASIC4.15□□□□□ -1.75
USP11P51784 AC024220.1-201ENST00000603675 484 ntBASIC4.15□□□□□ -1.75
USP11P51784 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.15□□□□□ -1.75
USP11P51784 AL365222.1-201ENST00000614661 98 ntBASIC4.15□□□□□ -1.75
USP11P51784 AL357075.2-201ENST00000614906 189 ntBASIC4.15□□□□□ -1.75
USP11P51784 U7.8-201ENST00000619968 63 ntBASIC4.15□□□□□ -1.75
USP11P51784 U6.99-201ENST00000637524 83 ntBASIC4.15□□□□□ -1.75
USP11P51784 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.15□□□□□ -1.75
USP11P51784 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
USP11P51784 AL353743.1-202ENST00000431724 1695 ntBASIC4.15□□□□□ -1.75
USP11P51784 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
USP11P51784 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USP11P51784 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.14□□□□□ -1.75
USP11P51784 Y_RNA.230-201ENST00000364348 109 ntBASIC4.14□□□□□ -1.75
USP11P51784 Y_RNA.319-201ENST00000365138 92 ntBASIC4.14□□□□□ -1.75
USP11P51784 Y_RNA.331-201ENST00000365267 102 ntBASIC4.14□□□□□ -1.75
USP11P51784 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.14□□□□□ -1.75
USP11P51784 RNU6-741P-201ENST00000383889 107 ntBASIC4.14□□□□□ -1.75
USP11P51784 Y_RNA.568-201ENST00000384742 113 ntBASIC4.14□□□□□ -1.75
USP11P51784 MIR186-201ENST00000384988 86 ntBASIC4.14□□□□□ -1.75
USP11P51784 MIR518D-201ENST00000385014 87 ntBASIC4.14□□□□□ -1.75
USP11P51784 RNU6-1168P-201ENST00000390831 104 ntBASIC4.14□□□□□ -1.75
USP11P51784 AL357075.1-201ENST00000404107 726 ntBASIC4.14□□□□□ -1.75
USP11P51784 AL390729.2-201ENST00000416137 156 ntBASIC4.14□□□□□ -1.75
USP11P51784 SNRPEP9-201ENST00000436794 238 ntBASIC4.14□□□□□ -1.75
USP11P51784 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.14□□□□□ -1.75
USP11P51784 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.14□□□□□ -1.75
USP11P51784 AC078918.1-201ENST00000498515 228 ntBASIC4.14□□□□□ -1.75
USP11P51784 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.14□□□□□ -1.75
USP11P51784 RNU6-313P-201ENST00000516317 112 ntBASIC4.14□□□□□ -1.75
USP11P51784 SNORA70.16-201ENST00000516390 95 ntBASIC4.14□□□□□ -1.75
USP11P51784 RNU6-703P-201ENST00000516946 107 ntBASIC4.14□□□□□ -1.75
USP11P51784 RNU6-58P-201ENST00000517143 103 ntBASIC4.14□□□□□ -1.75
USP11P51784 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.14□□□□□ -1.75
USP11P51784 TRAV28-201ENST00000557548 323 ntBASIC4.14□□□□□ -1.75
USP11P51784 ZNF192P1-203ENST00000565888 810 ntBASIC4.14□□□□□ -1.75
USP11P51784 AC008739.3-201ENST00000603262 127 ntBASIC4.14□□□□□ -1.75
USP11P51784 AC006001.4-201ENST00000622243 395 ntBASIC4.14□□□□□ -1.75
USP11P51784 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms