Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 U6.114-201ENST00000636407 96 ntBASIC1.31□□□□□ -2.2
ERFP50548 RNU4-15P-201ENST00000362613 141 ntBASIC1.3□□□□□ -2.2
ERFP50548 RNU4-13P-201ENST00000364019 141 ntBASIC1.3□□□□□ -2.2
ERFP50548 RNU6-607P-201ENST00000411283 108 ntBASIC1.3□□□□□ -2.2
ERFP50548 RPS3AP3-201ENST00000411933 242 ntBASIC1.3□□□□□ -2.2
ERFP50548 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.3□□□□□ -2.2
ERFP50548 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
ERFP50548 AL590556.1-201ENST00000423231 483 ntBASIC1.3□□□□□ -2.2
ERFP50548 AL513185.2-201ENST00000425543 193 ntBASIC1.3□□□□□ -2.2
ERFP50548 RPS29P29-201ENST00000456396 171 ntBASIC1.3□□□□□ -2.2
ERFP50548 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.3□□□□□ -2.2
ERFP50548 RNU6-1129P-201ENST00000515964 104 ntBASIC1.3□□□□□ -2.2
ERFP50548 SNORA31.17-201ENST00000516953 127 ntBASIC1.3□□□□□ -2.2
ERFP50548 RNA5SP490-201ENST00000517141 136 ntBASIC1.3□□□□□ -2.2
ERFP50548 AP001372.4-201ENST00000524889 472 ntBASIC1.3□□□□□ -2.2
ERFP50548 COPS8P3-201ENST00000526024 482 ntBASIC1.3□□□□□ -2.2
ERFP50548 AC018630.3-201ENST00000542637 96 ntBASIC1.3□□□□□ -2.2
ERFP50548 AC087883.1-201ENST00000551882 391 ntBASIC1.3□□□□□ -2.2
ERFP50548 AC009094.1-201ENST00000564443 426 ntBASIC1.3□□□□□ -2.2
ERFP50548 AC137800.2-201ENST00000574375 120 ntBASIC1.3□□□□□ -2.2
ERFP50548 SNORA59B-202ENST00000578183 701 ntBASIC1.3□□□□□ -2.2
ERFP50548 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.3□□□□□ -2.2
ERFP50548 MIR98-201ENST00000606724 119 ntBASIC1.3□□□□□ -2.2
ERFP50548 AC130454.1-201ENST00000622948 401 ntBASIC1.3□□□□□ -2.2
ERFP50548 AC007494.3-201ENST00000624660 743 ntBASIC1.3□□□□□ -2.2
ERFP50548 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
ERFP50548 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
ERFP50548 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.29□□□□□ -2.2
ERFP50548 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ERFP50548 RNU6-105P-201ENST00000363909 104 ntBASIC1.29□□□□□ -2.2
ERFP50548 Y_RNA.324-201ENST00000365165 102 ntBASIC1.29□□□□□ -2.2
ERFP50548 SNORD26-201ENST00000384147 75 ntBASIC1.29□□□□□ -2.2
ERFP50548 MIR30A-201ENST00000385092 71 ntBASIC1.29□□□□□ -2.2
ERFP50548 RNA5SP100-201ENST00000410903 110 ntBASIC1.29□□□□□ -2.2
ERFP50548 RNA5SP59-201ENST00000410922 110 ntBASIC1.29□□□□□ -2.2
ERFP50548 AC009310.1-201ENST00000414414 451 ntBASIC1.29□□□□□ -2.2
ERFP50548 HIGD1AP15-201ENST00000416198 280 ntBASIC1.29□□□□□ -2.2
ERFP50548 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.29□□□□□ -2.2
ERFP50548 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ERFP50548 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.29□□□□□ -2.2
ERFP50548 MTND1P30-201ENST00000441241 901 ntBASIC1.29□□□□□ -2.2
ERFP50548 AC243964.1-201ENST00000441814 261 ntBASIC1.29□□□□□ -2.2
ERFP50548 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.29□□□□□ -2.2
ERFP50548 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.29□□□□□ -2.2
ERFP50548 AC010409.1-201ENST00000487382 476 ntBASIC1.29□□□□□ -2.2
ERFP50548 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.29□□□□□ -2.2
ERFP50548 AC074344.1-201ENST00000512823 224 ntBASIC1.29□□□□□ -2.2
ERFP50548 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.29□□□□□ -2.2
ERFP50548 TRAV32-201ENST00000553993 340 ntBASIC1.29□□□□□ -2.2
ERFP50548 AC008015.1-201ENST00000555505 465 ntBASIC1.29□□□□□ -2.2
ERFP50548 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.29□□□□□ -2.2
ERFP50548 AC008269.2-201ENST00000561915 1105 ntBASIC1.29□□□□□ -2.2
ERFP50548 AC104984.5-201ENST00000586878 94 ntBASIC1.29□□□□□ -2.2
ERFP50548 AC022022.2-201ENST00000602989 360 ntBASIC1.29□□□□□ -2.2
ERFP50548 AL590229.1-201ENST00000603497 542 ntBASIC1.29□□□□□ -2.2
ERFP50548 AL034555.1-201ENST00000604816 211 ntBASIC1.29□□□□□ -2.2
ERFP50548 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.29□□□□□ -2.2
ERFP50548 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.29□□□□□ -2.2
ERFP50548 Z69720.2-201ENST00000624755 279 ntBASIC1.29□□□□□ -2.2
ERFP50548 SNORD98-201ENST00000636377 67 ntBASIC1.29□□□□□ -2.2
ERFP50548 U4.7-201ENST00000638126 106 ntBASIC1.29□□□□□ -2.2
ERFP50548 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.28□□□□□ -2.2
ERFP50548 RNU6-60P-201ENST00000364792 103 ntBASIC1.28□□□□□ -2.2
ERFP50548 RNU6-336P-201ENST00000364891 107 ntBASIC1.28□□□□□ -2.2
ERFP50548 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
ERFP50548 RNU6-174P-201ENST00000410406 106 ntBASIC1.28□□□□□ -2.2
ERFP50548 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.28□□□□□ -2.2
ERFP50548 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.28□□□□□ -2.2
ERFP50548 AL669831.1-202ENST00000428504 417 ntBASIC1.28□□□□□ -2.2
ERFP50548 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.28□□□□□ -2.2
ERFP50548 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.28□□□□□ -2.2
ERFP50548 GTF2IP13-201ENST00000438487 386 ntBASIC1.28□□□□□ -2.2
ERFP50548 SNRPEP8-201ENST00000442866 260 ntBASIC1.28□□□□□ -2.2
ERFP50548 AL031274.1-201ENST00000450334 232 ntBASIC1.28□□□□□ -2.2
ERFP50548 RNU6-232P-201ENST00000517144 64 ntBASIC1.28□□□□□ -2.2
ERFP50548 AC060788.1-201ENST00000521318 469 ntBASIC1.28□□□□□ -2.2
ERFP50548 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.28□□□□□ -2.2
ERFP50548 AL160236.1-201ENST00000556317 195 ntBASIC1.28□□□□□ -2.2
ERFP50548 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.28□□□□□ -2.2
ERFP50548 SNORD53B-201ENST00000577887 78 ntBASIC1.28□□□□□ -2.2
ERFP50548 MIR3169-201ENST00000578032 83 ntBASIC1.28□□□□□ -2.2
ERFP50548 AC090616.2-202ENST00000584248 222 ntBASIC1.28□□□□□ -2.2
ERFP50548 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
ERFP50548 AC092354.1-201ENST00000606057 376 ntBASIC1.28□□□□□ -2.2
ERFP50548 AC022513.1-201ENST00000624512 117 ntBASIC1.28□□□□□ -2.2
ERFP50548 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
ERFP50548 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.27□□□□□ -2.21
ERFP50548 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
ERFP50548 Y_RNA.99-201ENST00000363138 105 ntBASIC1.27□□□□□ -2.21
ERFP50548 RNU6-1029P-201ENST00000384109 107 ntBASIC1.27□□□□□ -2.21
ERFP50548 RNU6-160P-201ENST00000384591 107 ntBASIC1.27□□□□□ -2.21
ERFP50548 SNORA40.3-201ENST00000390964 122 ntBASIC1.27□□□□□ -2.21
ERFP50548 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.27□□□□□ -2.21
ERFP50548 AC007098.1-201ENST00000420122 367 ntBASIC1.27□□□□□ -2.21
ERFP50548 AL590135.1-201ENST00000422215 156 ntBASIC1.27□□□□□ -2.21
ERFP50548 AC019205.3-201ENST00000424573 156 ntBASIC1.27□□□□□ -2.21
ERFP50548 SDAD1P3-201ENST00000427380 333 ntBASIC1.27□□□□□ -2.21
ERFP50548 AC016700.2-201ENST00000446011 156 ntBASIC1.27□□□□□ -2.21
ERFP50548 HMGN2P18-201ENST00000450680 270 ntBASIC1.27□□□□□ -2.21
ERFP50548 RPL31P58-201ENST00000469001 379 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms