Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AP003122.3-201ENST00000526316 255 ntBASIC2.53□□□□□ -2
CLK1P49759 AC084851.1-201ENST00000529105 249 ntBASIC2.53□□□□□ -2
CLK1P49759 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.53□□□□□ -2
CLK1P49759 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.53□□□□□ -2
CLK1P49759 LINC00933-203ENST00000559812 219 ntBASIC2.53□□□□□ -2
CLK1P49759 LRRC37A5P-203ENST00000580181 585 ntBASIC2.53□□□□□ -2
CLK1P49759 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.53□□□□□ -2
CLK1P49759 AC022432.1-201ENST00000595739 310 ntBASIC2.53□□□□□ -2
CLK1P49759 AC002044.1-201ENST00000606707 158 ntBASIC2.53□□□□□ -2
CLK1P49759 RNU6-91P-201ENST00000607774 107 ntBASIC2.53□□□□□ -2
CLK1P49759 AL031601.2-202ENST00000622650 282 ntBASIC2.53□□□□□ -2
CLK1P49759 MTND4LP32-201ENST00000636111 270 ntBASIC2.53□□□□□ -2
CLK1P49759 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.53□□□□□ -2
CLK1P49759 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.52□□□□□ -2.01
CLK1P49759 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLK1P49759 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.52□□□□□ -2.01
CLK1P49759 Y_RNA.259-201ENST00000364619 101 ntBASIC2.52□□□□□ -2.01
CLK1P49759 Y_RNA.431-201ENST00000384086 102 ntBASIC2.52□□□□□ -2.01
CLK1P49759 RNU6-1297P-201ENST00000384415 104 ntBASIC2.52□□□□□ -2.01
CLK1P49759 MIR17-201ENST00000385012 84 ntBASIC2.52□□□□□ -2.01
CLK1P49759 MIR483-201ENST00000385070 76 ntBASIC2.52□□□□□ -2.01
CLK1P49759 AL360182.1-201ENST00000397433 468 ntBASIC2.52□□□□□ -2.01
CLK1P49759 RNU2-3P-201ENST00000410144 191 ntBASIC2.52□□□□□ -2.01
CLK1P49759 AC074085.1-201ENST00000413598 418 ntBASIC2.52□□□□□ -2.01
CLK1P49759 CYCSP33-201ENST00000414485 327 ntBASIC2.52□□□□□ -2.01
CLK1P49759 RPL21P90-201ENST00000415692 466 ntBASIC2.52□□□□□ -2.01
CLK1P49759 MYL8P-204ENST00000431574 518 ntBASIC2.52□□□□□ -2.01
CLK1P49759 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.52□□□□□ -2.01
CLK1P49759 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.52□□□□□ -2.01
CLK1P49759 AC003982.1-202ENST00000469928 248 ntBASIC2.52□□□□□ -2.01
CLK1P49759 RPS29P26-201ENST00000477483 171 ntBASIC2.52□□□□□ -2.01
CLK1P49759 RPS27P21-201ENST00000486977 252 ntBASIC2.52□□□□□ -2.01
CLK1P49759 AC116655.1-201ENST00000508324 901 ntBASIC2.52□□□□□ -2.01
CLK1P49759 MTND3P25-201ENST00000509243 135 ntBASIC2.52□□□□□ -2.01
CLK1P49759 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.52□□□□□ -2.01
CLK1P49759 RNU6-559P-201ENST00000516151 98 ntBASIC2.52□□□□□ -2.01
CLK1P49759 SNORA74D-201ENST00000516404 141 ntBASIC2.52□□□□□ -2.01
CLK1P49759 MIR514B-201ENST00000516774 80 ntBASIC2.52□□□□□ -2.01
CLK1P49759 Y_RNA.718-201ENST00000517110 102 ntBASIC2.52□□□□□ -2.01
CLK1P49759 RNU6-1315P-201ENST00000517187 99 ntBASIC2.52□□□□□ -2.01
CLK1P49759 CYCSP27-201ENST00000527643 293 ntBASIC2.52□□□□□ -2.01
CLK1P49759 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.52□□□□□ -2.01
CLK1P49759 APOOP3-201ENST00000536787 586 ntBASIC2.52□□□□□ -2.01
CLK1P49759 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.52□□□□□ -2.01
CLK1P49759 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.52□□□□□ -2.01
CLK1P49759 IMMP1LP2-201ENST00000552954 492 ntBASIC2.52□□□□□ -2.01
CLK1P49759 AC105137.2-201ENST00000569073 466 ntBASIC2.52□□□□□ -2.01
CLK1P49759 MIR4790-201ENST00000577799 79 ntBASIC2.52□□□□□ -2.01
CLK1P49759 MIR3941-201ENST00000582572 103 ntBASIC2.52□□□□□ -2.01
CLK1P49759 MIR548AC-201ENST00000585049 88 ntBASIC2.52□□□□□ -2.01
CLK1P49759 ZNF861P-201ENST00000588126 639 ntBASIC2.52□□□□□ -2.01
CLK1P49759 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.52□□□□□ -2.01
CLK1P49759 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.52□□□□□ -2.01
CLK1P49759 AL512643.1-201ENST00000635735 524 ntBASIC2.52□□□□□ -2.01
CLK1P49759 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CLK1P49759 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.52□□□□□ -2.01
CLK1P49759 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLK1P49759 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CLK1P49759 Y_RNA.132-201ENST00000363421 102 ntBASIC2.51□□□□□ -2.01
CLK1P49759 RNU6-266P-201ENST00000364225 107 ntBASIC2.51□□□□□ -2.01
CLK1P49759 SNORD42.2-201ENST00000365570 69 ntBASIC2.51□□□□□ -2.01
CLK1P49759 RNU6-43P-201ENST00000384302 107 ntBASIC2.51□□□□□ -2.01
CLK1P49759 MIR9-1-201ENST00000385198 89 ntBASIC2.51□□□□□ -2.01
CLK1P49759 SNORA48.2-201ENST00000390926 124 ntBASIC2.51□□□□□ -2.01
CLK1P49759 RNY4P36-201ENST00000391116 96 ntBASIC2.51□□□□□ -2.01
CLK1P49759 MIR1302-11-201ENST00000408051 138 ntBASIC2.51□□□□□ -2.01
CLK1P49759 MIR1302-9-201ENST00000408365 138 ntBASIC2.51□□□□□ -2.01
CLK1P49759 MIR1302-10-201ENST00000408734 138 ntBASIC2.51□□□□□ -2.01
CLK1P49759 RNU6-607P-201ENST00000411283 108 ntBASIC2.51□□□□□ -2.01
CLK1P49759 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.51□□□□□ -2.01
CLK1P49759 MTCO2P12-201ENST00000427426 682 ntBASIC2.51□□□□□ -2.01
CLK1P49759 AC005534.2-201ENST00000431047 433 ntBASIC2.51□□□□□ -2.01
CLK1P49759 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.51□□□□□ -2.01
CLK1P49759 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.51□□□□□ -2.01
CLK1P49759 AC107399.1-201ENST00000451226 265 ntBASIC2.51□□□□□ -2.01
CLK1P49759 RNU7-152P-201ENST00000458982 64 ntBASIC2.51□□□□□ -2.01
CLK1P49759 AC005741.1-201ENST00000511094 432 ntBASIC2.51□□□□□ -2.01
CLK1P49759 RNU1-86P-201ENST00000516108 154 ntBASIC2.51□□□□□ -2.01
CLK1P49759 RNU1-107P-201ENST00000516617 154 ntBASIC2.51□□□□□ -2.01
CLK1P49759 AC079598.5-201ENST00000547460 117 ntBASIC2.51□□□□□ -2.01
CLK1P49759 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.51□□□□□ -2.01
CLK1P49759 AC093249.1-201ENST00000567049 203 ntBASIC2.51□□□□□ -2.01
CLK1P49759 ELOCP29-201ENST00000588193 334 ntBASIC2.51□□□□□ -2.01
CLK1P49759 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.51□□□□□ -2.01
CLK1P49759 AC005000.2-201ENST00000605468 310 ntBASIC2.51□□□□□ -2.01
CLK1P49759 MIR1302-2-201ENST00000607096 138 ntBASIC2.51□□□□□ -2.01
CLK1P49759 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLK1P49759 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.51□□□□□ -2.01
CLK1P49759 AC008121.3-201ENST00000618726 433 ntBASIC2.51□□□□□ -2.01
CLK1P49759 AC098657.3-201ENST00000620434 263 ntBASIC2.51□□□□□ -2.01
CLK1P49759 SDR42E1P4-201ENST00000620894 481 ntBASIC2.51□□□□□ -2.01
CLK1P49759 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLK1P49759 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.51□□□□□ -2.01
CLK1P49759 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLK1P49759 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLK1P49759 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.5□□□□□ -2.01
CLK1P49759 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CLK1P49759 MIR6073-201ENST00000352083 89 ntBASIC2.5□□□□□ -2.01
CLK1P49759 SNORD3E-201ENST00000362899 217 ntBASIC2.5□□□□□ -2.01
CLK1P49759 Y_RNA.326-201ENST00000365176 113 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms