Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 snoU13.23-201ENST00000458863 104 ntBASIC2.16□□□□□ -2.06
BRCC3P46736 AC083904.1-201ENST00000487828 231 ntBASIC2.16□□□□□ -2.06
BRCC3P46736 HMGB1P30-201ENST00000492455 606 ntBASIC2.16□□□□□ -2.06
BRCC3P46736 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.16□□□□□ -2.06
BRCC3P46736 AC008526.1-201ENST00000509149 338 ntBASIC2.16□□□□□ -2.06
BRCC3P46736 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.16□□□□□ -2.06
BRCC3P46736 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.16□□□□□ -2.06
BRCC3P46736 AC015712.3-201ENST00000559380 164 ntBASIC2.16□□□□□ -2.06
BRCC3P46736 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.16□□□□□ -2.06
BRCC3P46736 AC105245.1-201ENST00000581934 244 ntBASIC2.16□□□□□ -2.06
BRCC3P46736 VN1R80P-201ENST00000597126 338 ntBASIC2.16□□□□□ -2.06
BRCC3P46736 AC092807.2-201ENST00000609367 243 ntBASIC2.16□□□□□ -2.06
BRCC3P46736 AL121757.2-201ENST00000611223 313 ntBASIC2.16□□□□□ -2.06
BRCC3P46736 Z69720.2-201ENST00000624755 279 ntBASIC2.16□□□□□ -2.06
BRCC3P46736 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
BRCC3P46736 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.15□□□□□ -2.06
BRCC3P46736 RNU6-487P-201ENST00000365430 104 ntBASIC2.15□□□□□ -2.07
BRCC3P46736 Y_RNA.453-201ENST00000384223 109 ntBASIC2.15□□□□□ -2.07
BRCC3P46736 MIR524-201ENST00000385242 87 ntBASIC2.15□□□□□ -2.07
BRCC3P46736 U8.13-201ENST00000390842 128 ntBASIC2.15□□□□□ -2.07
BRCC3P46736 RNU6-1140P-201ENST00000410517 106 ntBASIC2.15□□□□□ -2.07
BRCC3P46736 RNU6-1148P-201ENST00000410992 104 ntBASIC2.15□□□□□ -2.07
BRCC3P46736 POLHP1-201ENST00000411806 470 ntBASIC2.15□□□□□ -2.07
BRCC3P46736 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.15□□□□□ -2.07
BRCC3P46736 AC097463.2-201ENST00000421074 142 ntBASIC2.15□□□□□ -2.07
BRCC3P46736 EIF1P1-201ENST00000421436 341 ntBASIC2.15□□□□□ -2.07
BRCC3P46736 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.15□□□□□ -2.07
BRCC3P46736 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.15□□□□□ -2.07
BRCC3P46736 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.15□□□□□ -2.07
BRCC3P46736 SNORA43.2-201ENST00000516652 128 ntBASIC2.15□□□□□ -2.07
BRCC3P46736 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.15□□□□□ -2.07
BRCC3P46736 CR383656.8-201ENST00000549046 145 ntBASIC2.15□□□□□ -2.07
BRCC3P46736 MIR4769-201ENST00000584126 77 ntBASIC2.15□□□□□ -2.07
BRCC3P46736 APOOP1-201ENST00000604695 592 ntBASIC2.15□□□□□ -2.07
BRCC3P46736 CTHRC1P1-201ENST00000605383 469 ntBASIC2.15□□□□□ -2.07
BRCC3P46736 AC092794.1-201ENST00000612734 582 ntBASIC2.15□□□□□ -2.07
BRCC3P46736 DISC2.1-201ENST00000612827 205 ntBASIC2.15□□□□□ -2.07
BRCC3P46736 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.15□□□□□ -2.07
BRCC3P46736 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.15□□□□□ -2.07
BRCC3P46736 Z82209.1-201ENST00000422141 2135 ntBASIC2.14□□□□□ -2.07
BRCC3P46736 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
BRCC3P46736 Y_RNA.231-201ENST00000364358 102 ntBASIC2.14□□□□□ -2.07
BRCC3P46736 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.14□□□□□ -2.07
BRCC3P46736 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.14□□□□□ -2.07
BRCC3P46736 SRIP2-201ENST00000428470 166 ntBASIC2.14□□□□□ -2.07
BRCC3P46736 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.14□□□□□ -2.07
BRCC3P46736 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.14□□□□□ -2.07
BRCC3P46736 MTCYBP18-201ENST00000501056 747 ntBASIC2.14□□□□□ -2.07
BRCC3P46736 SNORA25.11-201ENST00000515935 105 ntBASIC2.14□□□□□ -2.07
BRCC3P46736 Y_RNA.665-201ENST00000516177 98 ntBASIC2.14□□□□□ -2.07
BRCC3P46736 SNORD60.2-201ENST00000516883 86 ntBASIC2.14□□□□□ -2.07
BRCC3P46736 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.14□□□□□ -2.07
BRCC3P46736 MIR5089-201ENST00000580047 84 ntBASIC2.14□□□□□ -2.07
BRCC3P46736 BNIP3P25-201ENST00000596023 559 ntBASIC2.14□□□□□ -2.07
BRCC3P46736 AC092747.3-201ENST00000603769 301 ntBASIC2.14□□□□□ -2.07
BRCC3P46736 AC103705.1-201ENST00000619013 241 ntBASIC2.14□□□□□ -2.07
BRCC3P46736 AC026585.1-201ENST00000619582 524 ntBASIC2.14□□□□□ -2.07
BRCC3P46736 SCARNA4-202ENST00000625402 129 ntBASIC2.14□□□□□ -2.07
BRCC3P46736 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.14□□□□□ -2.07
BRCC3P46736 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
BRCC3P46736 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
BRCC3P46736 RNU6-78P-201ENST00000362897 107 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 SNORA51.11-201ENST00000384442 131 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 RNU6-843P-201ENST00000384454 104 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 MIR218-1-201ENST00000384999 110 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 SNORD73A-201ENST00000386062 65 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 SNORD56-201ENST00000413522 71 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.13□□□□□ -2.07
BRCC3P46736 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.13□□□□□ -2.07
BRCC3P46736 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.13□□□□□ -2.07
BRCC3P46736 MRPS10P2-201ENST00000431226 381 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.13□□□□□ -2.07
BRCC3P46736 ERLEC1P1-201ENST00000433806 578 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 HMGB1P31-201ENST00000437242 427 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.13□□□□□ -2.07
BRCC3P46736 NFU1P2-201ENST00000448700 469 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.13□□□□□ -2.07
BRCC3P46736 RNU6-1208P-201ENST00000459588 107 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 HMGN2P26-201ENST00000463169 339 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 RPL36AP48-201ENST00000485521 314 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 AP001025.1-201ENST00000486139 332 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 AC108210.2-201ENST00000503681 201 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.13□□□□□ -2.07
BRCC3P46736 MTCYBP40-201ENST00000509390 1135 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 SNORA14.1-201ENST00000516113 141 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 SNORA31.23-201ENST00000517219 133 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 AC109329.1-201ENST00000518744 317 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 AP004607.1-201ENST00000524456 203 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.13□□□□□ -2.07
BRCC3P46736 DEFB122-202ENST00000569013 197 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 AC096772.1-201ENST00000609146 564 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 Z82243.1-201ENST00000609432 473 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 U2.17-201ENST00000611454 95 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 MIR3529-201ENST00000637713 78 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
BRCC3P46736 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
BRCC3P46736 Z75746.1-201ENST00000440243 2080 ntBASIC2.13□□□□□ -2.07
BRCC3P46736 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
BRCC3P46736 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms