Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC234781.5-201ENST00000508429 271 ntBASIC2.24□□□□□ -2.05
SOX3P41225 AC104576.1-201ENST00000524225 88 ntBASIC2.24□□□□□ -2.05
SOX3P41225 PRELID2P1-201ENST00000552837 301 ntBASIC2.24□□□□□ -2.05
SOX3P41225 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.24□□□□□ -2.05
SOX3P41225 AC103810.1-201ENST00000579873 453 ntBASIC2.24□□□□□ -2.05
SOX3P41225 MIR4742-201ENST00000581069 85 ntBASIC2.24□□□□□ -2.05
SOX3P41225 MIR5194-201ENST00000582634 120 ntBASIC2.24□□□□□ -2.05
SOX3P41225 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.24□□□□□ -2.05
SOX3P41225 AC024581.2-201ENST00000619986 252 ntBASIC2.24□□□□□ -2.05
SOX3P41225 AC097372.5-201ENST00000623665 376 ntBASIC2.24□□□□□ -2.05
SOX3P41225 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.24□□□□□ -2.05
SOX3P41225 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SOX3P41225 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.23□□□□□ -2.05
SOX3P41225 RNU6-845P-201ENST00000362578 103 ntBASIC2.23□□□□□ -2.05
SOX3P41225 RNU6-562P-201ENST00000362731 107 ntBASIC2.23□□□□□ -2.05
SOX3P41225 RNU6-1245P-201ENST00000411130 106 ntBASIC2.23□□□□□ -2.05
SOX3P41225 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.23□□□□□ -2.05
SOX3P41225 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.23□□□□□ -2.05
SOX3P41225 MTATP6P23-201ENST00000440153 476 ntBASIC2.23□□□□□ -2.05
SOX3P41225 AC124916.1-201ENST00000444020 547 ntBASIC2.23□□□□□ -2.05
SOX3P41225 MTND3P10-201ENST00000450967 341 ntBASIC2.23□□□□□ -2.05
SOX3P41225 AC112771.1-201ENST00000463581 102 ntBASIC2.23□□□□□ -2.05
SOX3P41225 RN7SL636P-201ENST00000497504 294 ntBASIC2.23□□□□□ -2.05
SOX3P41225 AC008526.1-201ENST00000509149 338 ntBASIC2.23□□□□□ -2.05
SOX3P41225 AC008413.1-201ENST00000511864 177 ntBASIC2.23□□□□□ -2.05
SOX3P41225 RNA5SP112-201ENST00000515937 99 ntBASIC2.23□□□□□ -2.05
SOX3P41225 RNU6-1088P-201ENST00000516850 104 ntBASIC2.23□□□□□ -2.05
SOX3P41225 SNORA31.18-201ENST00000517043 134 ntBASIC2.23□□□□□ -2.05
SOX3P41225 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.23□□□□□ -2.05
SOX3P41225 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.23□□□□□ -2.05
SOX3P41225 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.23□□□□□ -2.05
SOX3P41225 COX6CP5-201ENST00000527162 228 ntBASIC2.23□□□□□ -2.05
SOX3P41225 AC021269.2-201ENST00000532318 330 ntBASIC2.23□□□□□ -2.05
SOX3P41225 AC026464.5-201ENST00000562497 722 ntBASIC2.23□□□□□ -2.05
SOX3P41225 MIR4446-201ENST00000578505 67 ntBASIC2.23□□□□□ -2.05
SOX3P41225 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.23□□□□□ -2.05
SOX3P41225 AL049779.4-201ENST00000604500 156 ntBASIC2.23□□□□□ -2.05
SOX3P41225 AL022345.1-201ENST00000607292 135 ntBASIC2.23□□□□□ -2.05
SOX3P41225 MIR7157-201ENST00000635801 60 ntBASIC2.23□□□□□ -2.05
SOX3P41225 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SOX3P41225 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SOX3P41225 AC069528.2-201ENST00000624849 1991 ntBASIC2.23□□□□□ -2.05
SOX3P41225 Z75746.1-201ENST00000440243 2080 ntBASIC2.22□□□□□ -2.05
SOX3P41225 RNU6-486P-201ENST00000363116 107 ntBASIC2.22□□□□□ -2.05
SOX3P41225 RNU6-461P-201ENST00000364195 107 ntBASIC2.22□□□□□ -2.05
SOX3P41225 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SOX3P41225 SET-203ENST00000372688 801 ntTSL 2 BASIC2.22□□□□□ -2.05
SOX3P41225 MIR627-201ENST00000384979 97 ntBASIC2.22□□□□□ -2.05
SOX3P41225 RN7SKP32-201ENST00000410167 303 ntBASIC2.22□□□□□ -2.05
SOX3P41225 RNU6-1140P-201ENST00000410517 106 ntBASIC2.22□□□□□ -2.05
SOX3P41225 SNAP23P1-201ENST00000433229 246 ntBASIC2.22□□□□□ -2.05
SOX3P41225 MTND1P11-201ENST00000456661 876 ntBASIC2.22□□□□□ -2.05
SOX3P41225 AMD1P1-201ENST00000457220 922 ntBASIC2.22□□□□□ -2.05
SOX3P41225 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.22□□□□□ -2.05
SOX3P41225 RPL23AP70-201ENST00000483361 460 ntBASIC2.22□□□□□ -2.05
SOX3P41225 AC096745.1-201ENST00000509945 370 ntBASIC2.22□□□□□ -2.05
SOX3P41225 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.22□□□□□ -2.05
SOX3P41225 RNU6-566P-201ENST00000516790 107 ntBASIC2.22□□□□□ -2.05
SOX3P41225 SCARNA3-201ENST00000517097 143 ntBASIC2.22□□□□□ -2.05
SOX3P41225 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.22□□□□□ -2.05
SOX3P41225 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.22□□□□□ -2.05
SOX3P41225 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.22□□□□□ -2.05
SOX3P41225 TRAV32-201ENST00000553993 340 ntBASIC2.22□□□□□ -2.05
SOX3P41225 SCOCP1-201ENST00000554676 349 ntBASIC2.22□□□□□ -2.05
SOX3P41225 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.22□□□□□ -2.05
SOX3P41225 AC105137.2-201ENST00000569073 466 ntBASIC2.22□□□□□ -2.05
SOX3P41225 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.22□□□□□ -2.05
SOX3P41225 AC241585.2-209ENST00000638217 143 ntBASIC2.22□□□□□ -2.05
SOX3P41225 AC080128.1-201ENST00000474389 1917 ntBASIC2.22□□□□□ -2.05
SOX3P41225 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
SOX3P41225 MTND4P23-201ENST00000447723 1363 ntBASIC2.22□□□□□ -2.05
SOX3P41225 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SOX3P41225 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
SOX3P41225 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
SOX3P41225 RNU6-529P-201ENST00000363383 104 ntBASIC2.21□□□□□ -2.06
SOX3P41225 Y_RNA.166-201ENST00000363730 102 ntBASIC2.21□□□□□ -2.06
SOX3P41225 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
SOX3P41225 RNU6-301P-201ENST00000384277 107 ntBASIC2.21□□□□□ -2.06
SOX3P41225 RNU6-692P-201ENST00000384496 107 ntBASIC2.21□□□□□ -2.06
SOX3P41225 RNU6-1222P-201ENST00000384615 107 ntBASIC2.21□□□□□ -2.06
SOX3P41225 SNORA41-201ENST00000384675 132 ntBASIC2.21□□□□□ -2.06
SOX3P41225 RNU6-95P-201ENST00000384697 107 ntBASIC2.21□□□□□ -2.06
SOX3P41225 SNORA80E-201ENST00000384744 137 ntBASIC2.21□□□□□ -2.06
SOX3P41225 MIR544A-201ENST00000384855 91 ntBASIC2.21□□□□□ -2.06
SOX3P41225 U6atac.2-201ENST00000408644 118 ntBASIC2.21□□□□□ -2.06
SOX3P41225 RNU2-23P-201ENST00000410545 195 ntBASIC2.21□□□□□ -2.06
SOX3P41225 AL030996.1-201ENST00000411430 235 ntBASIC2.21□□□□□ -2.06
SOX3P41225 AC138623.1-201ENST00000418060 216 ntBASIC2.21□□□□□ -2.06
SOX3P41225 BX276092.3-201ENST00000424182 230 ntBASIC2.21□□□□□ -2.06
SOX3P41225 AC098614.3-201ENST00000438957 440 ntBASIC2.21□□□□□ -2.06
SOX3P41225 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.21□□□□□ -2.06
SOX3P41225 RPL9P9-202ENST00000466501 579 ntBASIC2.21□□□□□ -2.06
SOX3P41225 HMGN1P12-201ENST00000499125 195 ntBASIC2.21□□□□□ -2.06
SOX3P41225 AC026436.1-201ENST00000510537 270 ntBASIC2.21□□□□□ -2.06
SOX3P41225 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.21□□□□□ -2.06
SOX3P41225 RPPH1-2P-201ENST00000516688 293 ntBASIC2.21□□□□□ -2.06
SOX3P41225 RNU7-30P-201ENST00000516835 62 ntBASIC2.21□□□□□ -2.06
SOX3P41225 RNA5SP454-201ENST00000517231 127 ntBASIC2.21□□□□□ -2.06
SOX3P41225 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.21□□□□□ -2.06
SOX3P41225 CPDP1-201ENST00000579660 283 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms