Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.79□□□□□ -2.28
HLA-DMBP28068 HSPE1P19-201ENST00000603327 295 ntBASIC0.79□□□□□ -2.28
HLA-DMBP28068 AC013244.3-201ENST00000605614 388 ntBASIC0.79□□□□□ -2.28
HLA-DMBP28068 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.79□□□□□ -2.28
HLA-DMBP28068 RMST_4.1-201ENST00000616886 107 ntBASIC0.79□□□□□ -2.28
HLA-DMBP28068 AC026585.1-201ENST00000619582 524 ntBASIC0.79□□□□□ -2.28
HLA-DMBP28068 AL359740.1-201ENST00000624340 592 ntBASIC0.79□□□□□ -2.28
HLA-DMBP28068 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.79□□□□□ -2.28
HLA-DMBP28068 AC027514.1-201ENST00000588561 1603 ntBASIC0.78□□□□□ -2.28
HLA-DMBP28068 RNU4-92P-201ENST00000363783 136 ntBASIC0.78□□□□□ -2.28
HLA-DMBP28068 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.78□□□□□ -2.28
HLA-DMBP28068 MIR548B-201ENST00000385247 97 ntBASIC0.78□□□□□ -2.28
HLA-DMBP28068 SNORA12-201ENST00000391162 147 ntBASIC0.78□□□□□ -2.28
HLA-DMBP28068 MRPL35P1-201ENST00000404272 572 ntBASIC0.78□□□□□ -2.28
HLA-DMBP28068 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.78□□□□□ -2.28
HLA-DMBP28068 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.78□□□□□ -2.28
HLA-DMBP28068 DYNLT3P2-201ENST00000442517 295 ntBASIC0.78□□□□□ -2.28
HLA-DMBP28068 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.78□□□□□ -2.28
HLA-DMBP28068 AC022447.4-201ENST00000504053 364 ntBASIC0.78□□□□□ -2.28
HLA-DMBP28068 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.78□□□□□ -2.28
HLA-DMBP28068 Y_RNA.673-201ENST00000516306 88 ntBASIC0.78□□□□□ -2.28
HLA-DMBP28068 AC022616.6-201ENST00000520479 119 ntBASIC0.78□□□□□ -2.28
HLA-DMBP28068 MTND2P7-201ENST00000521337 640 ntBASIC0.78□□□□□ -2.28
HLA-DMBP28068 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.78□□□□□ -2.28
HLA-DMBP28068 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.78□□□□□ -2.28
HLA-DMBP28068 MIR3937-201ENST00000580135 106 ntBASIC0.78□□□□□ -2.28
HLA-DMBP28068 MIR4452-201ENST00000583004 71 ntBASIC0.78□□□□□ -2.28
HLA-DMBP28068 BNIP3P31-201ENST00000604515 566 ntBASIC0.78□□□□□ -2.28
HLA-DMBP28068 AL034555.1-201ENST00000604816 211 ntBASIC0.78□□□□□ -2.28
HLA-DMBP28068 AC121334.2-201ENST00000605387 271 ntBASIC0.78□□□□□ -2.28
HLA-DMBP28068 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.78□□□□□ -2.28
HLA-DMBP28068 AC103706.2-201ENST00000638080 240 ntBASIC0.78□□□□□ -2.28
HLA-DMBP28068 OR4G1P-203ENST00000641984 1631 ntBASIC0.78□□□□□ -2.29
HLA-DMBP28068 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.29
HLA-DMBP28068 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.77□□□□□ -2.29
HLA-DMBP28068 RNU6-371P-201ENST00000364283 108 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 SNORA63D-201ENST00000364359 132 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 SNORD114-22-201ENST00000365423 72 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 MIR194-1-201ENST00000384892 85 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 RPL23AP32-201ENST00000395315 459 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 EEF1A1P40-201ENST00000412883 573 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.77□□□□□ -2.29
HLA-DMBP28068 AC099677.2-201ENST00000436385 175 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 MTCYBP39-201ENST00000437562 491 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 RNA5SP269-201ENST00000459032 137 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 AC145146.1-201ENST00000496370 254 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.77□□□□□ -2.29
HLA-DMBP28068 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.77□□□□□ -2.29
HLA-DMBP28068 RNA5SP404-201ENST00000517118 132 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 AC019176.1-201ENST00000518519 225 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 AC105185.1-201ENST00000518705 535 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 SUMO2P18-201ENST00000518873 252 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.77□□□□□ -2.29
HLA-DMBP28068 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.77□□□□□ -2.29
HLA-DMBP28068 AC008015.1-201ENST00000555505 465 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 CYP3A52P-201ENST00000563326 91 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 HMGB1P33-201ENST00000563485 527 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.77□□□□□ -2.29
HLA-DMBP28068 AC136443.5-201ENST00000603741 370 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 AC069114.2-201ENST00000604699 304 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 AL158042.1-201ENST00000605338 460 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 AL139286.2-201ENST00000606838 396 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 AC013437.2-201ENST00000639587 677 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 MTND4P16-201ENST00000466108 1367 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 AC010615.1-201ENST00000594254 1764 ntBASIC0.77□□□□□ -2.29
HLA-DMBP28068 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
HLA-DMBP28068 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
HLA-DMBP28068 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.76□□□□□ -2.29
HLA-DMBP28068 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
HLA-DMBP28068 MIR96-201ENST00000362288 78 ntBASIC0.76□□□□□ -2.29
HLA-DMBP28068 Y_RNA.269-201ENST00000364685 89 ntBASIC0.76□□□□□ -2.29
HLA-DMBP28068 MIR544A-201ENST00000384855 91 ntBASIC0.76□□□□□ -2.29
HLA-DMBP28068 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.76□□□□□ -2.29
HLA-DMBP28068 ART2BP-201ENST00000453501 499 ntBASIC0.76□□□□□ -2.29
HLA-DMBP28068 AP000797.1-201ENST00000478870 387 ntBASIC0.76□□□□□ -2.29
HLA-DMBP28068 AC079140.3-201ENST00000511111 550 ntBASIC0.76□□□□□ -2.29
HLA-DMBP28068 SNORD116-28-201ENST00000516123 91 ntBASIC0.76□□□□□ -2.29
HLA-DMBP28068 RNU6-123P-201ENST00000516163 102 ntBASIC0.76□□□□□ -2.29
HLA-DMBP28068 RNU7-40P-201ENST00000516397 64 ntBASIC0.76□□□□□ -2.29
HLA-DMBP28068 RNA5SP481-201ENST00000516814 122 ntBASIC0.76□□□□□ -2.29
HLA-DMBP28068 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.76□□□□□ -2.29
HLA-DMBP28068 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.76□□□□□ -2.29
HLA-DMBP28068 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.76□□□□□ -2.29
HLA-DMBP28068 MIR5697-201ENST00000578045 78 ntBASIC0.76□□□□□ -2.29
HLA-DMBP28068 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.76□□□□□ -2.29
HLA-DMBP28068 AC090578.1-201ENST00000604955 591 ntBASIC0.76□□□□□ -2.29
HLA-DMBP28068 AL158032.1-201ENST00000605401 106 ntBASIC0.76□□□□□ -2.29
HLA-DMBP28068 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.76□□□□□ -2.29
HLA-DMBP28068 AC097478.2-201ENST00000610572 514 ntBASIC0.76□□□□□ -2.29
HLA-DMBP28068 AL391516.1-201ENST00000554380 2449 ntBASIC0.76□□□□□ -2.29
HLA-DMBP28068 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
HLA-DMBP28068 Y_RNA.97-201ENST00000363094 102 ntBASIC0.75□□□□□ -2.29
HLA-DMBP28068 SNORD56.2-201ENST00000363242 71 ntBASIC0.75□□□□□ -2.29
HLA-DMBP28068 RNU6-931P-201ENST00000363850 107 ntBASIC0.75□□□□□ -2.29
HLA-DMBP28068 RNU4-68P-201ENST00000364314 141 ntBASIC0.75□□□□□ -2.29
HLA-DMBP28068 RNU6-1187P-201ENST00000364771 110 ntBASIC0.75□□□□□ -2.29
HLA-DMBP28068 RNU6-1080P-201ENST00000383982 107 ntBASIC0.75□□□□□ -2.29
HLA-DMBP28068 RNU6-142P-201ENST00000384019 107 ntBASIC0.75□□□□□ -2.29
HLA-DMBP28068 RNU6-1065P-201ENST00000384513 106 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms