Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KRT4P19013 HIGD1AP2-201ENST00000446367 280 ntBASIC3.31□□□□□ -1.88
KRT4P19013 RNU7-87P-201ENST00000459343 62 ntBASIC3.31□□□□□ -1.88
KRT4P19013 COX6CP14-201ENST00000469580 174 ntBASIC3.31□□□□□ -1.88
KRT4P19013 RPS26P21-201ENST00000475397 348 ntBASIC3.31□□□□□ -1.88
KRT4P19013 RPL23AP45-201ENST00000476406 468 ntBASIC3.31□□□□□ -1.88
KRT4P19013 HSPE1P6-201ENST00000479457 291 ntBASIC3.31□□□□□ -1.88
KRT4P19013 ANXA2P1-201ENST00000505539 926 ntBASIC3.31□□□□□ -1.88
KRT4P19013 RNU6-496P-201ENST00000516145 99 ntBASIC3.31□□□□□ -1.88
KRT4P19013 RNA5SP471-201ENST00000516971 106 ntBASIC3.31□□□□□ -1.88
KRT4P19013 AC084851.1-201ENST00000529105 249 ntBASIC3.31□□□□□ -1.88
KRT4P19013 AC024405.2-202ENST00000532731 184 ntBASIC3.31□□□□□ -1.88
KRT4P19013 AC103996.1-201ENST00000555468 102 ntBASIC3.31□□□□□ -1.88
KRT4P19013 RPL23AP78-201ENST00000599928 470 ntBASIC3.31□□□□□ -1.88
KRT4P19013 AC073657.2-201ENST00000605661 303 ntBASIC3.31□□□□□ -1.88
KRT4P19013 AC240442.1-201ENST00000616055 283 ntBASIC3.31□□□□□ -1.88
KRT4P19013 AC097372.5-201ENST00000623665 376 ntBASIC3.31□□□□□ -1.88
KRT4P19013 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.31□□□□□ -1.88
KRT4P19013 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
KRT4P19013 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
KRT4P19013 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.3□□□□□ -1.88
KRT4P19013 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KRT4P19013 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.3□□□□□ -1.88
KRT4P19013 RNU4-90P-201ENST00000362773 141 ntBASIC3.3□□□□□ -1.88
KRT4P19013 U3.6-201ENST00000363622 211 ntBASIC3.3□□□□□ -1.88
KRT4P19013 RNU6-290P-201ENST00000365212 101 ntBASIC3.3□□□□□ -1.88
KRT4P19013 MIR613-201ENST00000385248 95 ntBASIC3.3□□□□□ -1.88
KRT4P19013 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
KRT4P19013 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
KRT4P19013 RNU6-1197P-201ENST00000391183 107 ntBASIC3.3□□□□□ -1.88
KRT4P19013 RPL21P3-201ENST00000395517 478 ntBASIC3.3□□□□□ -1.88
KRT4P19013 MIR887-201ENST00000401258 79 ntBASIC3.3□□□□□ -1.88
KRT4P19013 RN7SKP111-201ENST00000410349 271 ntBASIC3.3□□□□□ -1.88
KRT4P19013 Y_RNA.602-201ENST00000410535 92 ntBASIC3.3□□□□□ -1.88
KRT4P19013 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.3□□□□□ -1.88
KRT4P19013 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.3□□□□□ -1.88
KRT4P19013 CYCSP4-201ENST00000429682 331 ntBASIC3.3□□□□□ -1.88
KRT4P19013 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.3□□□□□ -1.88
KRT4P19013 AC146507.2-201ENST00000460608 476 ntBASIC3.3□□□□□ -1.88
KRT4P19013 RPL21P13-201ENST00000488305 481 ntBASIC3.3□□□□□ -1.88
KRT4P19013 AC093663.1-201ENST00000497190 394 ntBASIC3.3□□□□□ -1.88
KRT4P19013 AK3P2-201ENST00000507976 429 ntBASIC3.3□□□□□ -1.88
KRT4P19013 AC006445.2-201ENST00000510061 472 ntBASIC3.3□□□□□ -1.88
KRT4P19013 RNU6-1278P-201ENST00000516130 107 ntBASIC3.3□□□□□ -1.88
KRT4P19013 RNU6-1012P-201ENST00000516606 109 ntBASIC3.3□□□□□ -1.88
KRT4P19013 RN7SKP282-201ENST00000516824 299 ntBASIC3.3□□□□□ -1.88
KRT4P19013 SNORA31.26-201ENST00000517250 137 ntBASIC3.3□□□□□ -1.88
KRT4P19013 AC025755.1-201ENST00000521306 278 ntBASIC3.3□□□□□ -1.88
KRT4P19013 AC005476.1-201ENST00000554427 397 ntBASIC3.3□□□□□ -1.88
KRT4P19013 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.3□□□□□ -1.88
KRT4P19013 AC002545.1-201ENST00000592511 181 ntBASIC3.3□□□□□ -1.88
KRT4P19013 AC008121.1-201ENST00000603244 268 ntBASIC3.3□□□□□ -1.88
KRT4P19013 SRGNP1-201ENST00000603392 451 ntBASIC3.3□□□□□ -1.88
KRT4P19013 AL161798.1-201ENST00000604630 131 ntBASIC3.3□□□□□ -1.88
KRT4P19013 AL161629.2-201ENST00000615347 275 ntBASIC3.3□□□□□ -1.88
KRT4P19013 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.3□□□□□ -1.88
KRT4P19013 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
KRT4P19013 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.3□□□□□ -1.88
KRT4P19013 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.29□□□□□ -1.88
KRT4P19013 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
KRT4P19013 RNU1-70P-201ENST00000362618 164 ntBASIC3.29□□□□□ -1.88
KRT4P19013 RNA5SP119-201ENST00000362715 117 ntBASIC3.29□□□□□ -1.88
KRT4P19013 RNU6-227P-201ENST00000362865 103 ntBASIC3.29□□□□□ -1.88
KRT4P19013 SNORD14B-201ENST00000364533 90 ntBASIC3.29□□□□□ -1.88
KRT4P19013 RNU1-64P-201ENST00000365443 163 ntBASIC3.29□□□□□ -1.88
KRT4P19013 SNORA56-201ENST00000383966 129 ntBASIC3.29□□□□□ -1.88
KRT4P19013 SNORD63-201ENST00000384262 68 ntBASIC3.29□□□□□ -1.88
KRT4P19013 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
KRT4P19013 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.29□□□□□ -1.88
KRT4P19013 COX6CP10-201ENST00000416832 224 ntBASIC3.29□□□□□ -1.88
KRT4P19013 AL590383.1-201ENST00000428602 75 ntBASIC3.29□□□□□ -1.88
KRT4P19013 AL627311.1-201ENST00000431514 115 ntBASIC3.29□□□□□ -1.88
KRT4P19013 GOT2P5-201ENST00000433995 546 ntBASIC3.29□□□□□ -1.88
KRT4P19013 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.29□□□□□ -1.88
KRT4P19013 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KRT4P19013 RPS29P27-201ENST00000463711 170 ntBASIC3.29□□□□□ -1.88
KRT4P19013 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.29□□□□□ -1.88
KRT4P19013 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.29□□□□□ -1.88
KRT4P19013 FCF1P8-201ENST00000510322 597 ntBASIC3.29□□□□□ -1.88
KRT4P19013 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.29□□□□□ -1.88
KRT4P19013 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.29□□□□□ -1.88
KRT4P19013 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.29□□□□□ -1.88
KRT4P19013 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.29□□□□□ -1.88
KRT4P19013 AL645944.1-201ENST00000603857 493 ntBASIC3.29□□□□□ -1.88
KRT4P19013 AC072026.1-201ENST00000605023 201 ntBASIC3.29□□□□□ -1.88
KRT4P19013 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.29□□□□□ -1.88
KRT4P19013 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
KRT4P19013 AC008264.2-201ENST00000610193 3731 ntBASIC3.29□□□□□ -1.88
KRT4P19013 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
KRT4P19013 FAM35BP-202ENST00000497389 3337 ntBASIC3.28□□□□□ -1.88
KRT4P19013 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRT4P19013 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRT4P19013 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
KRT4P19013 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRT4P19013 Y_RNA.44-201ENST00000362676 108 ntBASIC3.28□□□□□ -1.88
KRT4P19013 Y_RNA.76-201ENST00000362931 109 ntBASIC3.28□□□□□ -1.88
KRT4P19013 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRT4P19013 CD24P4-201ENST00000382840 243 ntBASIC3.28□□□□□ -1.88
KRT4P19013 RNY1P5-201ENST00000383890 115 ntBASIC3.28□□□□□ -1.88
KRT4P19013 RNU6-937P-201ENST00000384325 106 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms