Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AL512360.1-201ENST00000555346 234 ntBASIC2.27□□□□□ -2.05
PDGFRAP16234 AC245505.1-201ENST00000556398 224 ntBASIC2.27□□□□□ -2.05
PDGFRAP16234 AC026464.5-201ENST00000562497 722 ntBASIC2.27□□□□□ -2.05
PDGFRAP16234 MIR3126-201ENST00000577443 74 ntBASIC2.27□□□□□ -2.05
PDGFRAP16234 AC007229.1-201ENST00000590455 412 ntBASIC2.27□□□□□ -2.05
PDGFRAP16234 AC009314.1-201ENST00000603871 304 ntBASIC2.27□□□□□ -2.05
PDGFRAP16234 ELOCP5-201ENST00000604924 333 ntBASIC2.27□□□□□ -2.05
PDGFRAP16234 AL356157.2-201ENST00000605122 111 ntBASIC2.27□□□□□ -2.05
PDGFRAP16234 AC087241.4-201ENST00000612441 480 ntBASIC2.27□□□□□ -2.05
PDGFRAP16234 AC241585.2-209ENST00000638217 143 ntBASIC2.27□□□□□ -2.05
PDGFRAP16234 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PDGFRAP16234 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
PDGFRAP16234 RNU6-692P-201ENST00000384496 107 ntBASIC2.26□□□□□ -2.05
PDGFRAP16234 MIR17-201ENST00000385012 84 ntBASIC2.26□□□□□ -2.05
PDGFRAP16234 RN7SKP192-201ENST00000411291 327 ntBASIC2.26□□□□□ -2.05
PDGFRAP16234 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.26□□□□□ -2.05
PDGFRAP16234 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.26□□□□□ -2.05
PDGFRAP16234 MTND3P21-201ENST00000433774 331 ntBASIC2.26□□□□□ -2.05
PDGFRAP16234 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.26□□□□□ -2.05
PDGFRAP16234 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.26□□□□□ -2.05
PDGFRAP16234 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.26□□□□□ -2.05
PDGFRAP16234 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.26□□□□□ -2.05
PDGFRAP16234 AC096638.1-201ENST00000444678 216 ntBASIC2.26□□□□□ -2.05
PDGFRAP16234 MTCO2P7-201ENST00000446518 666 ntBASIC2.26□□□□□ -2.05
PDGFRAP16234 RPS29P21-201ENST00000496272 170 ntBASIC2.26□□□□□ -2.05
PDGFRAP16234 AC022447.4-201ENST00000504053 364 ntBASIC2.26□□□□□ -2.05
PDGFRAP16234 AK3P2-201ENST00000507976 429 ntBASIC2.26□□□□□ -2.05
PDGFRAP16234 RNU5F-2P-201ENST00000516066 82 ntBASIC2.26□□□□□ -2.05
PDGFRAP16234 SCARNA16.3-201ENST00000516595 184 ntBASIC2.26□□□□□ -2.05
PDGFRAP16234 MIR514B-201ENST00000516774 80 ntBASIC2.26□□□□□ -2.05
PDGFRAP16234 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.26□□□□□ -2.05
PDGFRAP16234 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.26□□□□□ -2.05
PDGFRAP16234 NDUFA5P6-201ENST00000542110 379 ntBASIC2.26□□□□□ -2.05
PDGFRAP16234 AC103996.1-201ENST00000555468 102 ntBASIC2.26□□□□□ -2.05
PDGFRAP16234 AL118558.2-201ENST00000556294 238 ntBASIC2.26□□□□□ -2.05
PDGFRAP16234 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.26□□□□□ -2.05
PDGFRAP16234 AC107304.1-201ENST00000604229 296 ntBASIC2.26□□□□□ -2.05
PDGFRAP16234 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PDGFRAP16234 snoU2_19.1-201ENST00000362361 80 ntBASIC2.25□□□□□ -2.05
PDGFRAP16234 Y_RNA.41-201ENST00000362646 102 ntBASIC2.25□□□□□ -2.05
PDGFRAP16234 RNU6-1141P-201ENST00000364520 107 ntBASIC2.25□□□□□ -2.05
PDGFRAP16234 U3.13-201ENST00000364804 214 ntBASIC2.25□□□□□ -2.05
PDGFRAP16234 RNU4-20P-201ENST00000365601 151 ntBASIC2.25□□□□□ -2.05
PDGFRAP16234 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PDGFRAP16234 RNU6-43P-201ENST00000384302 107 ntBASIC2.25□□□□□ -2.05
PDGFRAP16234 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
PDGFRAP16234 MTND1P23-201ENST00000416931 372 ntBASIC2.25□□□□□ -2.05
PDGFRAP16234 ARL5AP1-201ENST00000418991 388 ntBASIC2.25□□□□□ -2.05
PDGFRAP16234 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.25□□□□□ -2.05
PDGFRAP16234 SNAP23P1-201ENST00000433229 246 ntBASIC2.25□□□□□ -2.05
PDGFRAP16234 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.25□□□□□ -2.05
PDGFRAP16234 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.25□□□□□ -2.05
PDGFRAP16234 MTND3P16-201ENST00000452205 344 ntBASIC2.25□□□□□ -2.05
PDGFRAP16234 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.25□□□□□ -2.05
PDGFRAP16234 RNA5SP137-201ENST00000516833 135 ntBASIC2.25□□□□□ -2.05
PDGFRAP16234 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.25□□□□□ -2.05
PDGFRAP16234 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.25□□□□□ -2.05
PDGFRAP16234 AC018630.3-201ENST00000542637 96 ntBASIC2.25□□□□□ -2.05
PDGFRAP16234 HMGB1P33-201ENST00000563485 527 ntBASIC2.25□□□□□ -2.05
PDGFRAP16234 AC116312.1-201ENST00000606841 314 ntBASIC2.25□□□□□ -2.05
PDGFRAP16234 AC064807.4-201ENST00000607201 407 ntBASIC2.25□□□□□ -2.05
PDGFRAP16234 AC092954.2-201ENST00000609103 430 ntBASIC2.25□□□□□ -2.05
PDGFRAP16234 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.25□□□□□ -2.05
PDGFRAP16234 AC015540.1-201ENST00000615828 501 ntBASIC2.25□□□□□ -2.05
PDGFRAP16234 AC099654.12-201ENST00000639868 649 ntBASIC2.25□□□□□ -2.05
PDGFRAP16234 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.25□□□□□ -2.05
PDGFRAP16234 AP000560.1-201ENST00000624150 1937 ntBASIC2.25□□□□□ -2.05
PDGFRAP16234 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
PDGFRAP16234 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PDGFRAP16234 Y_RNA.378-201ENST00000365652 113 ntBASIC2.24□□□□□ -2.05
PDGFRAP16234 SNORA11.4-201ENST00000408823 129 ntBASIC2.24□□□□□ -2.05
PDGFRAP16234 RN7SKP32-201ENST00000410167 303 ntBASIC2.24□□□□□ -2.05
PDGFRAP16234 RNU2-48P-201ENST00000410694 191 ntBASIC2.24□□□□□ -2.05
PDGFRAP16234 RPS15AP10-201ENST00000432472 382 ntBASIC2.24□□□□□ -2.05
PDGFRAP16234 MTCO2P3-201ENST00000442543 421 ntBASIC2.24□□□□□ -2.05
PDGFRAP16234 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.24□□□□□ -2.05
PDGFRAP16234 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.24□□□□□ -2.05
PDGFRAP16234 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.24□□□□□ -2.05
PDGFRAP16234 Y_RNA.654-201ENST00000497848 106 ntBASIC2.24□□□□□ -2.05
PDGFRAP16234 SNORA4.4-201ENST00000515921 135 ntBASIC2.24□□□□□ -2.05
PDGFRAP16234 RNU6-1038P-201ENST00000516516 104 ntBASIC2.24□□□□□ -2.05
PDGFRAP16234 RNU6-1069P-201ENST00000516612 133 ntBASIC2.24□□□□□ -2.05
PDGFRAP16234 SNORD60.2-201ENST00000516883 86 ntBASIC2.24□□□□□ -2.05
PDGFRAP16234 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.24□□□□□ -2.05
PDGFRAP16234 AP000763.2-201ENST00000540641 163 ntBASIC2.24□□□□□ -2.05
PDGFRAP16234 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.24□□□□□ -2.05
PDGFRAP16234 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.24□□□□□ -2.05
PDGFRAP16234 AC233702.2-202ENST00000562547 291 ntBASIC2.24□□□□□ -2.05
PDGFRAP16234 MIR4648-201ENST00000580107 72 ntBASIC2.24□□□□□ -2.05
PDGFRAP16234 AC092747.3-201ENST00000603769 301 ntBASIC2.24□□□□□ -2.05
PDGFRAP16234 AC018889.1-201ENST00000605372 397 ntBASIC2.24□□□□□ -2.05
PDGFRAP16234 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PDGFRAP16234 YWHAEP7-203ENST00000622054 312 ntBASIC2.24□□□□□ -2.05
PDGFRAP16234 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.24□□□□□ -2.05
PDGFRAP16234 RNU6-944P-201ENST00000364023 107 ntBASIC2.23□□□□□ -2.05
PDGFRAP16234 SNORD32A-201ENST00000364805 84 ntBASIC2.23□□□□□ -2.05
PDGFRAP16234 RNU6-546P-201ENST00000383991 107 ntBASIC2.23□□□□□ -2.05
PDGFRAP16234 MIR514A2-201ENST00000385131 88 ntBASIC2.23□□□□□ -2.05
PDGFRAP16234 MIR514A3-201ENST00000385132 88 ntBASIC2.23□□□□□ -2.05
PDGFRAP16234 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms