Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.04□□□□□ -2.42
ACANP16112 MIR3664-201ENST00000579074 99 ntBASIC-0.04□□□□□ -2.42
ACANP16112 AL513534.2-201ENST00000603836 250 ntBASIC-0.04□□□□□ -2.42
ACANP16112 AL079343.1-201ENST00000572358 1771 ntBASIC-0.04□□□□□ -2.42
ACANP16112 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.04□□□□□ -2.42
ACANP16112 MIRLET7D-201ENST00000362263 87 ntBASIC-0.04□□□□□ -2.42
ACANP16112 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.04□□□□□ -2.42
ACANP16112 RNA5SP128-201ENST00000365305 116 ntBASIC-0.04□□□□□ -2.42
ACANP16112 RNU6V-201ENST00000384105 107 ntBASIC-0.04□□□□□ -2.42
ACANP16112 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.04□□□□□ -2.42
ACANP16112 RNU6-1065P-201ENST00000384513 106 ntBASIC-0.04□□□□□ -2.42
ACANP16112 MIR194-1-201ENST00000384892 85 ntBASIC-0.04□□□□□ -2.42
ACANP16112 RNA5SP496-201ENST00000391240 109 ntBASIC-0.04□□□□□ -2.42
ACANP16112 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.04□□□□□ -2.42
ACANP16112 SNORD75.1-201ENST00000408373 60 ntBASIC-0.04□□□□□ -2.42
ACANP16112 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC-0.04□□□□□ -2.42
ACANP16112 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.04□□□□□ -2.42
ACANP16112 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.04□□□□□ -2.42
ACANP16112 AC006026.2-201ENST00000457376 180 ntBASIC-0.04□□□□□ -2.42
ACANP16112 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC-0.04□□□□□ -2.42
ACANP16112 SNORA31.2-201ENST00000516019 134 ntBASIC-0.04□□□□□ -2.42
ACANP16112 AC109329.1-201ENST00000518744 317 ntBASIC-0.04□□□□□ -2.42
ACANP16112 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-0.04□□□□□ -2.42
ACANP16112 AC022616.8-201ENST00000533569 253 ntBASIC-0.04□□□□□ -2.42
ACANP16112 VBP1-203ENST00000535916 944 ntTSL 2 BASIC-0.04□□□□□ -2.42
ACANP16112 ROCK1P1-201ENST00000573767 549 ntBASIC-0.04□□□□□ -2.42
ACANP16112 7SK.10-201ENST00000621414 298 ntBASIC-0.04□□□□□ -2.42
ACANP16112 AC079416.3-201ENST00000624479 549 ntBASIC-0.04□□□□□ -2.42
ACANP16112 AC068205.3-201ENST00000636385 468 ntBASIC-0.04□□□□□ -2.42
ACANP16112 RNU6-444P-201ENST00000383988 108 ntBASIC-0.05□□□□□ -2.42
ACANP16112 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.05□□□□□ -2.42
ACANP16112 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.05□□□□□ -2.42
ACANP16112 AL096829.2-201ENST00000446582 742 ntBASIC-0.05□□□□□ -2.42
ACANP16112 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC-0.05□□□□□ -2.42
ACANP16112 AL353752.1-201ENST00000454946 260 ntBASIC-0.05□□□□□ -2.42
ACANP16112 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
ACANP16112 RPL30P1-201ENST00000488676 339 ntBASIC-0.05□□□□□ -2.42
ACANP16112 AC022493.2-201ENST00000506122 481 ntBASIC-0.05□□□□□ -2.42
ACANP16112 AC116347.2-201ENST00000514912 523 ntBASIC-0.05□□□□□ -2.42
ACANP16112 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.05□□□□□ -2.42
ACANP16112 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.05□□□□□ -2.42
ACANP16112 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC-0.05□□□□□ -2.42
ACANP16112 HMGB1P33-201ENST00000563485 527 ntBASIC-0.05□□□□□ -2.42
ACANP16112 MIR3115-201ENST00000577915 68 ntBASIC-0.05□□□□□ -2.42
ACANP16112 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC-0.05□□□□□ -2.42
ACANP16112 AF038458.1-201ENST00000588406 262 ntBASIC-0.05□□□□□ -2.42
ACANP16112 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.05□□□□□ -2.42
ACANP16112 AL031176.1-201ENST00000604554 466 ntBASIC-0.05□□□□□ -2.42
ACANP16112 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC-0.05□□□□□ -2.42
ACANP16112 AC021506.2-201ENST00000612354 169 ntBASIC-0.05□□□□□ -2.42
ACANP16112 5S_rRNA.11-201ENST00000618635 84 ntBASIC-0.05□□□□□ -2.42
ACANP16112 AC092447.10-201ENST00000620607 1652 ntBASIC-0.05□□□□□ -2.42
ACANP16112 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.05□□□□□ -2.42
ACANP16112 MIR377-201ENST00000362145 69 ntBASIC-0.05□□□□□ -2.42
ACANP16112 RNU5A-1-201ENST00000362698 116 ntBASIC-0.05□□□□□ -2.42
ACANP16112 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.05□□□□□ -2.42
ACANP16112 SNORD114-6-201ENST00000364393 72 ntBASIC-0.05□□□□□ -2.42
ACANP16112 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.05□□□□□ -2.42
ACANP16112 MIR196A2-201ENST00000385189 110 ntBASIC-0.05□□□□□ -2.42
ACANP16112 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
ACANP16112 AC063976.4-201ENST00000421971 163 ntBASIC-0.05□□□□□ -2.42
ACANP16112 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.05□□□□□ -2.42
ACANP16112 MTCO2P12-201ENST00000427426 682 ntBASIC-0.05□□□□□ -2.42
ACANP16112 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC-0.05□□□□□ -2.42
ACANP16112 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.05□□□□□ -2.42
ACANP16112 SNRPEP9-201ENST00000436794 238 ntBASIC-0.05□□□□□ -2.42
ACANP16112 DAP3P1-201ENST00000441522 278 ntBASIC-0.05□□□□□ -2.42
ACANP16112 AL592447.1-201ENST00000447592 540 ntBASIC-0.05□□□□□ -2.42
ACANP16112 AC104073.1-201ENST00000451988 151 ntBASIC-0.05□□□□□ -2.42
ACANP16112 RNU6-488P-201ENST00000515918 99 ntBASIC-0.05□□□□□ -2.42
ACANP16112 RNU6-1092P-201ENST00000516955 87 ntBASIC-0.05□□□□□ -2.42
ACANP16112 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.05□□□□□ -2.42
ACANP16112 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.05□□□□□ -2.42
ACANP16112 AC009237.15-201ENST00000610252 501 ntBASIC-0.05□□□□□ -2.42
ACANP16112 AC130324.3-201ENST00000614165 542 ntBASIC-0.05□□□□□ -2.42
ACANP16112 AC078938.1-201ENST00000620993 318 ntBASIC-0.05□□□□□ -2.42
ACANP16112 AC092634.7-201ENST00000621022 103 ntBASIC-0.05□□□□□ -2.42
ACANP16112 MIR4315-1-201ENST00000636800 73 ntBASIC-0.05□□□□□ -2.42
ACANP16112 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.05□□□□□ -2.42
ACANP16112 ATM-228ENST00000639240 498 ntTSL 5 BASIC-0.05□□□□□ -2.42
ACANP16112 MIR4315-2-201ENST00000640925 73 ntBASIC-0.05□□□□□ -2.42
ACANP16112 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-0.05□□□□□ -2.42
ACANP16112 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.06□□□□□ -2.42
ACANP16112 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.06□□□□□ -2.42
ACANP16112 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.06□□□□□ -2.42
ACANP16112 RNU6-898P-201ENST00000365627 104 ntBASIC-0.06□□□□□ -2.42
ACANP16112 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.06□□□□□ -2.42
ACANP16112 RPS15AP9-201ENST00000439856 381 ntBASIC-0.06□□□□□ -2.42
ACANP16112 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC-0.06□□□□□ -2.42
ACANP16112 C1DP5-201ENST00000525775 383 ntBASIC-0.06□□□□□ -2.42
ACANP16112 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.06□□□□□ -2.42
ACANP16112 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.06□□□□□ -2.42
ACANP16112 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC-0.06□□□□□ -2.42
ACANP16112 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.06□□□□□ -2.42
ACANP16112 AC090888.2-201ENST00000559765 1144 ntBASIC-0.06□□□□□ -2.42
ACANP16112 MIR4431-201ENST00000579990 94 ntBASIC-0.06□□□□□ -2.42
ACANP16112 AC126365.2-201ENST00000580630 379 ntBASIC-0.06□□□□□ -2.42
ACANP16112 MIR8064-201ENST00000612863 90 ntBASIC-0.06□□□□□ -2.42
ACANP16112 AC091912.2-201ENST00000624798 167 ntBASIC-0.06□□□□□ -2.42
ACANP16112 AL109659.3-201ENST00000624985 950 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms