Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AL135938.1-201ENST00000443141 297 ntBASIC2.48□□□□□ -2.01
HLA-DOBP13765 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DOBP13765 RPS26P21-201ENST00000475397 348 ntBASIC2.48□□□□□ -2.01
HLA-DOBP13765 GZMAP1-201ENST00000503054 631 ntBASIC2.48□□□□□ -2.01
HLA-DOBP13765 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DOBP13765 RNU6-264P-201ENST00000517134 104 ntBASIC2.48□□□□□ -2.01
HLA-DOBP13765 SNRPGP18-201ENST00000553000 214 ntBASIC2.48□□□□□ -2.01
HLA-DOBP13765 MIR5696-201ENST00000578474 85 ntBASIC2.48□□□□□ -2.01
HLA-DOBP13765 AC090897.2-201ENST00000581715 130 ntBASIC2.48□□□□□ -2.01
HLA-DOBP13765 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DOBP13765 AC009318.2-201ENST00000610917 651 ntBASIC2.48□□□□□ -2.01
HLA-DOBP13765 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
HLA-DOBP13765 AC110079.1-202ENST00000635213 138 ntBASIC2.48□□□□□ -2.01
HLA-DOBP13765 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
HLA-DOBP13765 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DOBP13765 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
HLA-DOBP13765 AC110774.1-201ENST00000623567 2018 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 AC103988.1-201ENST00000566382 2177 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.47□□□□□ -2.01
HLA-DOBP13765 RNU6-490P-201ENST00000362985 107 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 SNORD50.1-201ENST00000362987 71 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 Y_RNA.112-201ENST00000363250 102 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 RNU6-1222P-201ENST00000384615 107 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
HLA-DOBP13765 AC096664.2-201ENST00000411843 406 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.47□□□□□ -2.01
HLA-DOBP13765 EIF1AXP1-201ENST00000419267 435 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 RPL23AP95-201ENST00000426806 265 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DOBP13765 OSTCP8-201ENST00000445117 448 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 MIR2053-201ENST00000459295 91 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 FO393415.2-201ENST00000480085 343 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 AC022447.4-201ENST00000504053 364 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 AC022493.2-201ENST00000506122 481 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 AC020661.2-201ENST00000560114 134 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 SNRPGP17-201ENST00000603780 214 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 AC093732.2-201ENST00000607950 274 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 AC096772.1-201ENST00000609146 564 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DOBP13765 AC107871.2-201ENST00000612894 502 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 uc_338.14-201ENST00000613162 166 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 uc_338.22-201ENST00000622722 187 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-DOBP13765 AC009541.1-201ENST00000438279 2662 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 ZNF299P-201ENST00000406845 1804 ntBASIC2.47□□□□□ -2.01
HLA-DOBP13765 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HLA-DOBP13765 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HLA-DOBP13765 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HLA-DOBP13765 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
HLA-DOBP13765 MIR26A1-201ENST00000362205 77 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 Y_RNA.123-201ENST00000363338 102 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 RNU1-112P-201ENST00000364401 164 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 RNU6-1141P-201ENST00000364520 107 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 SNORD32A-201ENST00000364805 84 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 CD24P4-201ENST00000382840 243 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 RNU6-1027P-201ENST00000383998 107 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 RNU6-474P-201ENST00000384243 107 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 Y_RNA.463-201ENST00000384271 102 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 Y_RNA.533-201ENST00000384596 114 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 MIR544A-201ENST00000384855 91 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 MIR559-201ENST00000385188 96 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DOBP13765 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DOBP13765 AC243428.1-201ENST00000421099 264 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DOBP13765 AC004383.1-201ENST00000438135 289 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 AL137792.2-201ENST00000443484 235 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 AL031659.1-201ENST00000447075 539 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DOBP13765 AC079354.2-201ENST00000453523 154 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.46□□□□□ -2.02
HLA-DOBP13765 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.46□□□□□ -2.02
HLA-DOBP13765 AC103975.1-201ENST00000482506 483 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 AC068781.1-201ENST00000488231 618 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 RPL17P19-201ENST00000489069 552 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DOBP13765 RN7SKP282-201ENST00000516824 299 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 CBX3P8-201ENST00000532412 525 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 AC016256.1-201ENST00000547971 354 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 AC079600.2-201ENST00000550076 130 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DOBP13765 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DOBP13765 SUB1P3-201ENST00000564581 315 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 MIR3605-201ENST00000583214 100 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.46□□□□□ -2.02
HLA-DOBP13765 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DOBP13765 HMGB1P24-202ENST00000615653 685 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 AL137790.1-201ENST00000634283 177 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 AC002543.1-201ENST00000299783 1954 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 Z82195.2-201ENST00000612348 18351 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
HLA-DOBP13765 MTND4P27-201ENST00000450813 1354 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 FAM35CP-201ENST00000554755 2470 ntBASIC2.46□□□□□ -2.02
HLA-DOBP13765 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-DOBP13765 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.46□□□□□ -2.02
HLA-DOBP13765 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
HLA-DOBP13765 MTND5P30-201ENST00000452896 1731 ntBASIC2.45□□□□□ -2.02
HLA-DOBP13765 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DOBP13765 SNORA11.1-201ENST00000408133 129 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms