| STAG3L2 | P0CL84 | RNU6-48P-201 | ENST00000384161 | 107 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | RNU6-36P-201 | ENST00000384172 | 107 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | RNU6-4P-201 | ENST00000384205 | 107 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | RNU6-5P-201 | ENST00000384238 | 107 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | RNU6-3P-201 | ENST00000384314 | 107 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | RNU6-16P-201 | ENST00000384385 | 107 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | RNU6-692P-201 | ENST00000384496 | 107 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | RNU6-15P-201 | ENST00000384534 | 107 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | RNU6-2-201 | ENST00000384627 | 107 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | RNU6-29P-201 | ENST00000384637 | 107 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | RNU6-9-201 | ENST00000384776 | 107 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | RNU6-33P-201 | ENST00000384793 | 107 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | AL627390.1-201 | ENST00000396055 | 340 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | RN7SKP61-201 | ENST00000410642 | 295 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | RNU2-41P-201 | ENST00000410991 | 178 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | AL354695.1-201 | ENST00000427935 | 228 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | AL365184.2-201 | ENST00000431139 | 435 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | SNRPGP13-201 | ENST00000442212 | 177 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | AL442638.1-201 | ENST00000443359 | 237 nt | TSL 5 BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | AC007395.1-201 | ENST00000451333 | 677 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | AC016925.1-201 | ENST00000458303 | 298 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | AC034244.1-201 | ENST00000507687 | 207 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | RPS3A-208 | ENST00000509736 | 576 nt | TSL 2 BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | RNU7-40P-201 | ENST00000516397 | 64 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | CCDC7-208 | ENST00000537047 | 657 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | AC079907.1-201 | ENST00000552707 | 374 nt | TSL 3 BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | AL157911.1-202 | ENST00000554123 | 502 nt | TSL 3 BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | BNIP3P8-201 | ENST00000597863 | 560 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | AL356157.2-201 | ENST00000605122 | 111 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | RNU6-6P-201 | ENST00000606623 | 107 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | AL451064.1-201 | ENST00000607718 | 471 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | MIR8065-201 | ENST00000620577 | 100 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | AC138649.3-201 | ENST00000622154 | 254 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| STAG3L2 | P0CL84 | RNU6-203P-201 | ENST00000384038 | 104 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | Y_RNA.510-201 | ENST00000384511 | 114 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | MIR194-1-201 | ENST00000384892 | 85 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | OR6C66P-201 | ENST00000414917 | 930 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AL645937.4-201 | ENST00000419702 | 389 nt | TSL 2 BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | SNX2P2-201 | ENST00000424553 | 323 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | MTCO3P29-201 | ENST00000432119 | 779 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AC015922.2-201 | ENST00000435593 | 184 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AL121601.2-201 | ENST00000438019 | 707 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AC069257.2-201 | ENST00000441819 | 155 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AL606662.1-201 | ENST00000445763 | 553 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | RNU7-14P-201 | ENST00000459331 | 62 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AL627309.4-201 | ENST00000496488 | 457 nt | TSL 5 BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | UBE2V1P12-201 | ENST00000503954 | 474 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AC063919.1-201 | ENST00000514281 | 254 nt | TSL 3 BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | RN7SKP179-201 | ENST00000516126 | 217 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | RNU5F-4P-201 | ENST00000516581 | 114 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | RNU6-1098P-201 | ENST00000516772 | 96 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | SNORA31.24-201 | ENST00000517232 | 57 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AC022616.3-201 | ENST00000523940 | 148 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AP006219.1-201 | ENST00000580258 | 472 nt | TSL 3 BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | HMGN1P30-201 | ENST00000589286 | 268 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | VN1R107P-201 | ENST00000601784 | 209 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | RPL17P51-201 | ENST00000605218 | 238 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AL121992.2-201 | ENST00000606262 | 256 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | MIR3976-201 | ENST00000606807 | 139 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AC091965.1-202 | ENST00000607662 | 397 nt | TSL 3 BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | ZNFX1-AS1_2.1-201 | ENST00000610973 | 93 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | PCGEM1.1-201 | ENST00000613431 | 131 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | MIR7843-201 | ENST00000622274 | 79 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AC006927.3-201 | ENST00000638789 | 384 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AC091812.1-201 | ENST00000432235 | 1948 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | RNU1-96P-201 | ENST00000364163 | 162 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | SNORD115-7-201 | ENST00000365306 | 82 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | RNU6-116P-201 | ENST00000384042 | 109 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | MIR504-201 | ENST00000385065 | 83 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | RNU2-8P-201 | ENST00000410727 | 190 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | HIGD1AP15-201 | ENST00000416198 | 280 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | MTATP6P16-201 | ENST00000434543 | 526 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AL009048.1-201 | ENST00000450437 | 298 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | snoU13.27-201 | ENST00000459278 | 104 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AL163195.1-201 | ENST00000496941 | 348 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | LINC02220-201 | ENST00000510065 | 270 nt | TSL 5 BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AC124854.1-202 | ENST00000513779 | 339 nt | TSL 3 BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | Y_RNA.672-201 | ENST00000516289 | 104 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | RNA5SP404-201 | ENST00000517118 | 132 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | MDM2-221 | ENST00000517852 | 393 nt | TSL 1 (best) BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AC023050.3-201 | ENST00000541142 | 333 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AL512310.8-201 | ENST00000550183 | 120 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | HSPE1P4-201 | ENST00000550617 | 308 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | ZNF321P-202 | ENST00000550843 | 495 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AL161670.1-201 | ENST00000554348 | 137 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AC068338.1-201 | ENST00000565567 | 176 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AC025887.1-201 | ENST00000578349 | 264 nt | TSL 3 BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AP005136.1-201 | ENST00000579765 | 429 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | FAS-AS1.2-201 | ENST00000620386 | 170 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AC009033.1-201 | ENST00000624279 | 431 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AC099654.5-201 | ENST00000636479 | 350 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AC241585.2-209 | ENST00000638217 | 143 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | ABCA5-201 | ENST00000392676 | 8220 nt | APPRIS P1 TSL 1 (best) BASIC | 1.07 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | AC092268.1-201 | ENST00000342691 | 405 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | RNU6-336P-201 | ENST00000364891 | 107 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | MIR620-201 | ENST00000385232 | 95 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | U8.13-201 | ENST00000390842 | 128 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | SNORA26.3-201 | ENST00000391119 | 136 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | SNORA11.1-201 | ENST00000408133 | 129 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| STAG3L2 | P0CL84 | RNA5SP508-201 | ENST00000411327 | 119 nt | BASIC | 1.06 | □□□□□ -2.24 | | |