Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC023158.2-201ENST00000614876 543 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 MRPL35P1-201ENST00000404272 572 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.55□□□□□ -2.32
FREM3P0C091 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.55□□□□□ -2.32
FREM3P0C091 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.55□□□□□ -2.32
FREM3P0C091 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.55□□□□□ -2.32
FREM3P0C091 HMGN2P9-201ENST00000476875 229 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.55□□□□□ -2.32
FREM3P0C091 AC079395.1-201ENST00000510981 262 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 RNU5A-4P-201ENST00000516588 111 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 RNU6-914P-201ENST00000516749 109 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 AL356057.1-201ENST00000533798 831 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.55□□□□□ -2.32
FREM3P0C091 AC092325.1-201ENST00000566449 554 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 MIR15A-201ENST00000607334 83 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 RNU6-946P-201ENST00000383878 107 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 SNORA29-201ENST00000384183 140 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 RNU6-505P-201ENST00000384427 107 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 MIR520A-201ENST00000384862 85 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 MIR625-201ENST00000385047 85 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 MIR301A-201ENST00000385261 86 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 RNA5SP390-201ENST00000410191 113 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.55□□□□□ -2.32
FREM3P0C091 MTCO2P25-201ENST00000447065 681 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
FREM3P0C091 snoU13.27-201ENST00000459278 104 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 snoU109.2-201ENST00000459316 135 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 MTCO3P27-201ENST00000514397 196 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 RNA5SP330-201ENST00000517096 96 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 AC036111.3-201ENST00000526389 112 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 AC087897.1-201ENST00000550134 156 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 AC008945.2-201ENST00000606056 604 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 AL022345.2-201ENST00000606307 135 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 AC130324.3-201ENST00000614165 542 ntBASIC0.55□□□□□ -2.32
FREM3P0C091 RNU1-36P-201ENST00000365130 165 ntBASIC0.54□□□□□ -2.32
FREM3P0C091 RNU6-1222P-201ENST00000384615 107 ntBASIC0.54□□□□□ -2.32
FREM3P0C091 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
FREM3P0C091 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.54□□□□□ -2.32
FREM3P0C091 RNU6-953P-201ENST00000459154 107 ntBASIC0.54□□□□□ -2.32
FREM3P0C091 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.54□□□□□ -2.32
FREM3P0C091 RPL39P36-201ENST00000490784 156 ntBASIC0.54□□□□□ -2.32
FREM3P0C091 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.54□□□□□ -2.32
FREM3P0C091 SUMO2P5-201ENST00000506790 245 ntBASIC0.54□□□□□ -2.32
FREM3P0C091 AC137800.2-201ENST00000574375 120 ntBASIC0.54□□□□□ -2.32
FREM3P0C091 MIR4661-201ENST00000582720 75 ntBASIC0.54□□□□□ -2.32
FREM3P0C091 AC007363.1-201ENST00000604736 620 ntBASIC0.54□□□□□ -2.32
FREM3P0C091 AC022893.3-201ENST00000607665 437 ntBASIC0.54□□□□□ -2.32
FREM3P0C091 AL159153.1-201ENST00000619688 317 ntBASIC0.54□□□□□ -2.32
FREM3P0C091 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
FREM3P0C091 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.54□□□□□ -2.32
FREM3P0C091 AC069282.1-201ENST00000411911 526 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 AL365338.1-201ENST00000422282 858 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 AC099677.2-201ENST00000436385 175 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.53□□□□□ -2.32
FREM3P0C091 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.53□□□□□ -2.32
FREM3P0C091 AK3P2-201ENST00000507976 429 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.53□□□□□ -2.32
FREM3P0C091 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.53□□□□□ -2.32
FREM3P0C091 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.53□□□□□ -2.32
FREM3P0C091 AP003465.2-201ENST00000602571 373 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 AL353778.1-201ENST00000603149 408 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 AL138889.2-201ENST00000603883 242 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 AC007742.2-201ENST00000618226 398 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 AC006927.2-201ENST00000639256 389 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 MTND5P33-201ENST00000571250 1450 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 RNU6-1176P-201ENST00000390955 107 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 MTND4P3-201ENST00000417829 541 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.53□□□□□ -2.32
FREM3P0C091 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.53□□□□□ -2.32
FREM3P0C091 PRPS1P1-201ENST00000445305 876 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 AL358794.1-201ENST00000445689 381 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.53□□□□□ -2.32
FREM3P0C091 RNU1-131P-201ENST00000458943 161 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 MTND1P36-201ENST00000522384 936 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 CENPUP1-201ENST00000526649 1202 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 AL442163.3-201ENST00000554110 156 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.53□□□□□ -2.32
FREM3P0C091 AC078795.2-201ENST00000602835 1252 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 AC099785.1-201ENST00000605697 437 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 AC068205.3-201ENST00000636385 468 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 MTND5P42-201ENST00000637720 498 ntBASIC0.53□□□□□ -2.32
FREM3P0C091 AC092104.1-201ENST00000497346 1441 ntBASIC0.53□□□□□ -2.33
FREM3P0C091 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 RNY3P13-201ENST00000365542 102 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 SNORA4.3-201ENST00000365564 137 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 PIGPP2-201ENST00000411569 458 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.52□□□□□ -2.33
FREM3P0C091 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.52□□□□□ -2.33
FREM3P0C091 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.52□□□□□ -2.33
FREM3P0C091 RPS26P45-201ENST00000471748 340 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 AC092989.1-201ENST00000481235 277 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 AC074344.1-201ENST00000512823 224 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 Y_RNA.689-201ENST00000516589 107 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 RNU6-677P-201ENST00000516914 101 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.52□□□□□ -2.33
FREM3P0C091 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.52□□□□□ -2.33
FREM3P0C091 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.52□□□□□ -2.33
FREM3P0C091 AC133485.1-201ENST00000567176 124 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 AC138907.6-201ENST00000568401 126 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms