Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SNRPA1P09661 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SNRPA1P09661 AC093831.2-201ENST00000624393 3427 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.47□□□□□ -1.85
SNRPA1P09661 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SNRPA1P09661 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SNRPA1P09661 RNY1P16-201ENST00000363063 111 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 RNA5SP68-201ENST00000363885 119 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 RNY3P11-201ENST00000364153 102 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 RNU6-26P-201ENST00000383985 107 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 Y_RNA.557-201ENST00000384680 107 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 MIR568-201ENST00000385036 95 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 RNU1-101P-201ENST00000391171 127 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 RNU2-23P-201ENST00000410545 195 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 AC099799.1-201ENST00000439809 192 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.47□□□□□ -1.85
SNRPA1P09661 AL353752.1-201ENST00000454946 260 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 RPL23AP14-201ENST00000468281 468 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 AC128713.1-201ENST00000471495 306 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 AC015911.1-201ENST00000495111 156 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 AC116655.1-201ENST00000508324 901 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 RNU6-377P-201ENST00000515965 102 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 RNU6-703P-201ENST00000516946 107 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 AC109479.2-201ENST00000517842 174 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 AP005902.1-201ENST00000521358 186 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 AC008269.2-201ENST00000561915 1105 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 MIR6817-201ENST00000615588 66 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 AL132822.1-201ENST00000617063 513 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 AC027309.3-201ENST00000623419 351 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 SNORA50A-202ENST00000629536 136 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 U2.21-201ENST00000637295 81 ntBASIC3.47□□□□□ -1.85
SNRPA1P09661 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SNRPA1P09661 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.47□□□□□ -1.85
SNRPA1P09661 CUL1P1-201ENST00000509510 2425 ntBASIC3.46□□□□□ -1.85
SNRPA1P09661 AC004944.1-201ENST00000517807 3059 ntBASIC3.46□□□□□ -1.86
SNRPA1P09661 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
SNRPA1P09661 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
SNRPA1P09661 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SNRPA1P09661 RNU6-78P-201ENST00000362897 107 ntBASIC3.46□□□□□ -1.86
SNRPA1P09661 RNU6-884P-201ENST00000363889 107 ntBASIC3.46□□□□□ -1.86
SNRPA1P09661 RNU6-450P-201ENST00000364654 107 ntBASIC3.46□□□□□ -1.86
SNRPA1P09661 RNU6-898P-201ENST00000365627 104 ntBASIC3.46□□□□□ -1.86
SNRPA1P09661 RNU6-196P-201ENST00000384315 107 ntBASIC3.46□□□□□ -1.86
SNRPA1P09661 MIR181A2-201ENST00000384863 110 ntBASIC3.46□□□□□ -1.86
SNRPA1P09661 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SNRPA1P09661 AL591034.2-201ENST00000402839 359 ntBASIC3.46□□□□□ -1.86
SNRPA1P09661 MIR548F4-201ENST00000408515 105 ntBASIC3.46□□□□□ -1.86
SNRPA1P09661 HMGB3P2-201ENST00000411913 584 ntBASIC3.46□□□□□ -1.86
SNRPA1P09661 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.46□□□□□ -1.86
SNRPA1P09661 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.46□□□□□ -1.86
SNRPA1P09661 AC096644.2-201ENST00000429278 159 ntBASIC3.46□□□□□ -1.86
SNRPA1P09661 AC013470.1-201ENST00000453438 462 ntBASIC3.46□□□□□ -1.86
SNRPA1P09661 RNU6-612P-201ENST00000516909 102 ntBASIC3.46□□□□□ -1.86
SNRPA1P09661 COX6CP5-201ENST00000527162 228 ntBASIC3.46□□□□□ -1.86
SNRPA1P09661 GNAI2P1-201ENST00000541815 315 ntBASIC3.46□□□□□ -1.86
SNRPA1P09661 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.46□□□□□ -1.86
SNRPA1P09661 AC103988.1-201ENST00000566382 2177 ntBASIC3.46□□□□□ -1.86
SNRPA1P09661 ZNF72P-201ENST00000425869 1908 ntBASIC3.46□□□□□ -1.86
SNRPA1P09661 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.45□□□□□ -1.86
SNRPA1P09661 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SNRPA1P09661 Y_RNA.39-201ENST00000362620 98 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 RNU6-778P-201ENST00000363269 103 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 RNU6-336P-201ENST00000364891 107 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SNRPA1P09661 Y_RNA.389-201ENST00000383924 113 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 Y_RNA.455-201ENST00000384230 98 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 RNU6-1156P-201ENST00000410365 100 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 AL451074.5-201ENST00000415894 435 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 HMGN2P30-201ENST00000423237 256 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 RPS29P6-201ENST00000438196 145 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.45□□□□□ -1.86
SNRPA1P09661 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.45□□□□□ -1.86
SNRPA1P09661 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.45□□□□□ -1.86
SNRPA1P09661 CHEK2P4-201ENST00000450340 246 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.45□□□□□ -1.86
SNRPA1P09661 SNORA31.1-201ENST00000515993 133 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 SNORA31.5-201ENST00000516190 133 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 RNU6-928P-201ENST00000516876 104 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.45□□□□□ -1.86
SNRPA1P09661 AC113195.1-201ENST00000579952 141 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 MIR3605-201ENST00000583214 100 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 AL355598.1-201ENST00000604169 202 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 AC005046.1-201ENST00000608515 625 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 MIR8076-201ENST00000611401 83 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 MIR6076-201ENST00000617521 113 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.45□□□□□ -1.86
SNRPA1P09661 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.45□□□□□ -1.86
SNRPA1P09661 AL606534.2-204ENST00000635008 178 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 U4.7-201ENST00000638126 106 ntBASIC3.45□□□□□ -1.86
SNRPA1P09661 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SNRPA1P09661 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SNRPA1P09661 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.45□□□□□ -1.86
SNRPA1P09661 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SNRPA1P09661 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SNRPA1P09661 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 Y_RNA.153-201ENST00000363615 91 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 RNU1-73P-201ENST00000383971 164 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 Y_RNA.577-201ENST00000384794 101 ntBASIC3.44□□□□□ -1.86
SNRPA1P09661 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 188.8 ms