Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 MTND6P13-201ENST00000443510 523 ntBASIC1.04□□□□□ -2.24
COL4A2P08572 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.04□□□□□ -2.24
COL4A2P08572 RPS27P1-201ENST00000450552 247 ntBASIC1.04□□□□□ -2.24
COL4A2P08572 AC006026.2-201ENST00000457376 180 ntBASIC1.04□□□□□ -2.24
COL4A2P08572 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.04□□□□□ -2.24
COL4A2P08572 AC018868.1-201ENST00000491307 315 ntBASIC1.04□□□□□ -2.24
COL4A2P08572 HMGB1P35-201ENST00000503360 598 ntBASIC1.04□□□□□ -2.24
COL4A2P08572 AC093852.1-201ENST00000503587 266 ntBASIC1.04□□□□□ -2.24
COL4A2P08572 AC104136.1-201ENST00000512969 394 ntBASIC1.04□□□□□ -2.24
COL4A2P08572 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.04□□□□□ -2.24
COL4A2P08572 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.04□□□□□ -2.24
COL4A2P08572 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.04□□□□□ -2.24
COL4A2P08572 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.04□□□□□ -2.24
COL4A2P08572 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.04□□□□□ -2.24
COL4A2P08572 BNIP3P30-201ENST00000601184 574 ntBASIC1.04□□□□□ -2.24
COL4A2P08572 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.04□□□□□ -2.24
COL4A2P08572 AC012409.4-201ENST00000612923 249 ntBASIC1.04□□□□□ -2.24
COL4A2P08572 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.04□□□□□ -2.24
COL4A2P08572 AC008133.2-201ENST00000624540 351 ntBASIC1.04□□□□□ -2.24
COL4A2P08572 FARSBP1-201ENST00000435808 1778 ntBASIC1.04□□□□□ -2.24
COL4A2P08572 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.04□□□□□ -2.24
COL4A2P08572 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
COL4A2P08572 SNORA75B-201ENST00000384053 137 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 MIR544A-201ENST00000384855 91 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 MIR532-201ENST00000385025 91 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 MIR10A-201ENST00000385043 110 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 RNU6-387P-201ENST00000411331 105 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.03□□□□□ -2.24
COL4A2P08572 AL158823.1-201ENST00000418441 478 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.03□□□□□ -2.24
COL4A2P08572 MTND1P30-201ENST00000441241 901 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
COL4A2P08572 RNU6-333P-201ENST00000459117 107 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 RPL30P6-201ENST00000475925 342 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 MTND2P33-201ENST00000506452 1031 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 RBBP4P6-201ENST00000508098 202 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 Y_RNA.687-201ENST00000516558 91 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 SNORA43.2-201ENST00000516652 128 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 SNORA31.16-201ENST00000516773 139 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.03□□□□□ -2.24
COL4A2P08572 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.03□□□□□ -2.24
COL4A2P08572 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.03□□□□□ -2.24
COL4A2P08572 IMMP1LP2-201ENST00000552954 492 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 AC233702.2-202ENST00000562547 291 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 AC011458.1-201ENST00000604034 617 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 SNORD114-21-201ENST00000606412 72 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 AC138749.5-201ENST00000611461 208 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 AC116165.2-201ENST00000616705 206 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 AC104010.1-201ENST00000616889 150 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 SCARNA4-202ENST00000625402 129 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 AC019226.2-201ENST00000625973 424 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.03□□□□□ -2.24
COL4A2P08572 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.03□□□□□ -2.24
COL4A2P08572 snoU2_19.1-201ENST00000362361 80 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 RNU1-23P-201ENST00000363361 144 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
COL4A2P08572 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
COL4A2P08572 SNORA20.2-201ENST00000383922 131 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 MIR518A2-201ENST00000384966 87 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 RNU1-139P-201ENST00000391307 165 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 RPS3AP36-201ENST00000398190 775 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 RNA5SP450-201ENST00000411206 102 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.03□□□□□ -2.24
COL4A2P08572 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.03□□□□□ -2.24
COL4A2P08572 RPS24P1-201ENST00000438550 371 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 USP9YP12-201ENST00000450481 570 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.03□□□□□ -2.24
COL4A2P08572 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.03□□□□□ -2.24
COL4A2P08572 MED28P2-201ENST00000475771 317 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 MTCO3P9-201ENST00000506989 781 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 AC104806.1-201ENST00000508720 308 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 MTND3P25-201ENST00000509243 135 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 AC074344.1-201ENST00000512823 224 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 RNU6-123P-201ENST00000516163 102 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.03□□□□□ -2.24
COL4A2P08572 AC093249.1-201ENST00000567049 203 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.03□□□□□ -2.24
COL4A2P08572 RN7SL793P-201ENST00000583259 296 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 MIR4295-201ENST00000585286 85 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.03□□□□□ -2.24
COL4A2P08572 AC234772.3-201ENST00000602277 528 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.03□□□□□ -2.24
COL4A2P08572 AC093788.1-201ENST00000609356 927 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 AL132822.1-201ENST00000617063 513 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 AC026585.1-201ENST00000619582 524 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 AC091932.3-201ENST00000624223 323 ntBASIC1.03□□□□□ -2.24
COL4A2P08572 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.03□□□□□ -2.24
COL4A2P08572 RNU5F-6P-201ENST00000362979 116 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 Y_RNA.251-201ENST00000364551 99 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 RNU4-42P-201ENST00000364738 142 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 RNU6-116P-201ENST00000384042 109 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 RNU6-39P-201ENST00000384344 107 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 RAP1BP3-201ENST00000407180 549 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 Y_RNA.597-201ENST00000410463 100 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.02□□□□□ -2.25
COL4A2P08572 GAPDHP17-201ENST00000449858 1001 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.02□□□□□ -2.25
COL4A2P08572 RNU7-125P-201ENST00000458760 62 ntBASIC1.02□□□□□ -2.25
COL4A2P08572 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms