Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NEFMP07197 Y_RNA.150-201ENST00000363562 102 ntBASIC4.4□□□□□ -1.71
NEFMP07197 U3.6-201ENST00000363622 211 ntBASIC4.4□□□□□ -1.71
NEFMP07197 MIR10A-201ENST00000385043 110 ntBASIC4.4□□□□□ -1.71
NEFMP07197 MIR34A-201ENST00000385130 110 ntBASIC4.4□□□□□ -1.71
NEFMP07197 SNORA12.2-201ENST00000391040 156 ntBASIC4.4□□□□□ -1.71
NEFMP07197 RPS29P13-201ENST00000402041 169 ntBASIC4.4□□□□□ -1.71
NEFMP07197 RNA5SP129-201ENST00000410276 118 ntBASIC4.4□□□□□ -1.71
NEFMP07197 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.4□□□□□ -1.71
NEFMP07197 AC091390.3-201ENST00000426478 338 ntBASIC4.4□□□□□ -1.71
NEFMP07197 AC005326.1-201ENST00000429197 123 ntBASIC4.4□□□□□ -1.71
NEFMP07197 PIGFP3-201ENST00000441918 722 ntBASIC4.4□□□□□ -1.71
NEFMP07197 HIGD1AP2-201ENST00000446367 280 ntBASIC4.4□□□□□ -1.71
NEFMP07197 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.4□□□□□ -1.71
NEFMP07197 AC006483.1-201ENST00000487308 313 ntBASIC4.4□□□□□ -1.71
NEFMP07197 AC010469.2-201ENST00000496412 480 ntBASIC4.4□□□□□ -1.71
NEFMP07197 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.4□□□□□ -1.71
NEFMP07197 RNU6-1338P-201ENST00000516328 91 ntBASIC4.4□□□□□ -1.71
NEFMP07197 Y_RNA.706-201ENST00000516933 99 ntBASIC4.4□□□□□ -1.71
NEFMP07197 MIR3921-201ENST00000577308 85 ntBASIC4.4□□□□□ -1.71
NEFMP07197 AL133393.1-201ENST00000603277 287 ntBASIC4.4□□□□□ -1.71
NEFMP07197 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.4□□□□□ -1.71
NEFMP07197 MAPK10-362ENST00000641864 4484 ntBASIC4.4□□□□□ -1.71
NEFMP07197 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NEFMP07197 Y_RNA.65-201ENST00000362846 100 ntBASIC4.39□□□□□ -1.71
NEFMP07197 RNU6-227P-201ENST00000362865 103 ntBASIC4.39□□□□□ -1.71
NEFMP07197 Y_RNA.200-201ENST00000364018 102 ntBASIC4.39□□□□□ -1.71
NEFMP07197 SNORA38.1-201ENST00000364172 131 ntBASIC4.39□□□□□ -1.71
NEFMP07197 Y_RNA.245-201ENST00000364493 95 ntBASIC4.39□□□□□ -1.71
NEFMP07197 Y_RNA.358-201ENST00000365491 99 ntBASIC4.39□□□□□ -1.71
NEFMP07197 RNU6-746P-201ENST00000384112 109 ntBASIC4.39□□□□□ -1.71
NEFMP07197 RNU6-886P-201ENST00000384319 105 ntBASIC4.39□□□□□ -1.71
NEFMP07197 RNU1-101P-201ENST00000391171 127 ntBASIC4.39□□□□□ -1.71
NEFMP07197 RNA5SP31-201ENST00000411144 127 ntBASIC4.39□□□□□ -1.71
NEFMP07197 AC079780.1-201ENST00000428259 207 ntBASIC4.39□□□□□ -1.71
NEFMP07197 MTCO3P29-201ENST00000432119 779 ntBASIC4.39□□□□□ -1.71
NEFMP07197 AL445305.1-201ENST00000432577 575 ntBASIC4.39□□□□□ -1.71
NEFMP07197 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.39□□□□□ -1.71
NEFMP07197 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.39□□□□□ -1.71
NEFMP07197 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.39□□□□□ -1.71
NEFMP07197 AP002770.2-201ENST00000543613 532 ntBASIC4.39□□□□□ -1.71
NEFMP07197 HIGD1AP1-201ENST00000550979 275 ntBASIC4.39□□□□□ -1.71
NEFMP07197 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.39□□□□□ -1.71
NEFMP07197 RPL23AP78-201ENST00000599928 470 ntBASIC4.39□□□□□ -1.71
NEFMP07197 Y_RNA.772-201ENST00000606692 102 ntBASIC4.39□□□□□ -1.71
NEFMP07197 AC005046.1-201ENST00000608515 625 ntBASIC4.39□□□□□ -1.71
NEFMP07197 AC091903.1-201ENST00000624322 454 ntBASIC4.39□□□□□ -1.71
NEFMP07197 AL450472.1-202ENST00000637286 180 ntBASIC4.39□□□□□ -1.71
NEFMP07197 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.39□□□□□ -1.71
NEFMP07197 SRP72P2-201ENST00000344851 1979 ntBASIC4.38□□□□□ -1.71
NEFMP07197 AC002546.1-201ENST00000588041 2504 ntBASIC4.38□□□□□ -1.71
NEFMP07197 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
NEFMP07197 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.38□□□□□ -1.71
NEFMP07197 AC073346.2-201ENST00000624724 2058 ntBASIC4.38□□□□□ -1.71
NEFMP07197 RNU6-1266P-201ENST00000362794 105 ntBASIC4.38□□□□□ -1.71
NEFMP07197 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NEFMP07197 MIR1290-201ENST00000408735 78 ntBASIC4.38□□□□□ -1.71
NEFMP07197 AL356867.1-201ENST00000429623 299 ntBASIC4.38□□□□□ -1.71
NEFMP07197 AC092185.1-201ENST00000491371 97 ntBASIC4.38□□□□□ -1.71
NEFMP07197 RNU7-175P-201ENST00000515915 61 ntBASIC4.38□□□□□ -1.71
NEFMP07197 AC005476.1-201ENST00000554427 397 ntBASIC4.38□□□□□ -1.71
NEFMP07197 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.38□□□□□ -1.71
NEFMP07197 AC136932.1-201ENST00000574771 208 ntBASIC4.38□□□□□ -1.71
NEFMP07197 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.38□□□□□ -1.71
NEFMP07197 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NEFMP07197 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
NEFMP07197 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NEFMP07197 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC4.37□□□□□ -1.71
NEFMP07197 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.37□□□□□ -1.71
NEFMP07197 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
NEFMP07197 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NEFMP07197 Y_RNA.405-201ENST00000383979 100 ntBASIC4.37□□□□□ -1.71
NEFMP07197 Y_RNA.451-201ENST00000384200 100 ntBASIC4.37□□□□□ -1.71
NEFMP07197 Y_RNA.524-201ENST00000384564 100 ntBASIC4.37□□□□□ -1.71
NEFMP07197 Y_RNA.561-201ENST00000384694 100 ntBASIC4.37□□□□□ -1.71
NEFMP07197 SNORA19-201ENST00000384737 128 ntBASIC4.37□□□□□ -1.71
NEFMP07197 Y_RNA.581-201ENST00000391017 97 ntBASIC4.37□□□□□ -1.71
NEFMP07197 AL139156.1-201ENST00000412785 841 ntBASIC4.37□□□□□ -1.71
NEFMP07197 Z85995.1-201ENST00000415547 335 ntBASIC4.37□□□□□ -1.71
NEFMP07197 TMEM167AP1-201ENST00000423409 219 ntBASIC4.37□□□□□ -1.71
NEFMP07197 RPL23AP22-201ENST00000437556 453 ntBASIC4.37□□□□□ -1.71
NEFMP07197 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.37□□□□□ -1.71
NEFMP07197 RNU7-87P-201ENST00000459343 62 ntBASIC4.37□□□□□ -1.71
NEFMP07197 RPS29P27-201ENST00000463711 170 ntBASIC4.37□□□□□ -1.71
NEFMP07197 AL359273.1-201ENST00000510918 627 ntBASIC4.37□□□□□ -1.71
NEFMP07197 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.37□□□□□ -1.71
NEFMP07197 CASP1P1-201ENST00000526345 212 ntBASIC4.37□□□□□ -1.71
NEFMP07197 uc_338.1-201ENST00000612113 180 ntBASIC4.37□□□□□ -1.71
NEFMP07197 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.37□□□□□ -1.71
NEFMP07197 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.37□□□□□ -1.71
NEFMP07197 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NEFMP07197 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.37□□□□□ -1.71
NEFMP07197 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.36□□□□□ -1.71
NEFMP07197 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NEFMP07197 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NEFMP07197 Y_RNA.277-201ENST00000364754 102 ntBASIC4.36□□□□□ -1.71
NEFMP07197 RNU6-662P-201ENST00000384253 104 ntBASIC4.36□□□□□ -1.71
NEFMP07197 Y_RNA.464-201ENST00000384282 110 ntBASIC4.36□□□□□ -1.71
NEFMP07197 RNU6-378P-201ENST00000384324 107 ntBASIC4.36□□□□□ -1.71
NEFMP07197 AC005300.1-201ENST00000428401 373 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 284 ms