Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.46□□□□□ -2.18
CD74P04233 AC112492.4-201ENST00000456549 352 ntBASIC1.46□□□□□ -2.18
CD74P04233 AL122001.1-201ENST00000457027 370 ntBASIC1.46□□□□□ -2.18
CD74P04233 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.46□□□□□ -2.18
CD74P04233 AC018868.1-201ENST00000491307 315 ntBASIC1.46□□□□□ -2.18
CD74P04233 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.46□□□□□ -2.18
CD74P04233 AC108210.2-201ENST00000503681 201 ntBASIC1.46□□□□□ -2.18
CD74P04233 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.46□□□□□ -2.18
CD74P04233 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.46□□□□□ -2.18
CD74P04233 AC117532.1-201ENST00000514638 323 ntBASIC1.46□□□□□ -2.18
CD74P04233 AC109329.1-201ENST00000518744 317 ntBASIC1.46□□□□□ -2.18
CD74P04233 AP001893.2-201ENST00000526949 202 ntBASIC1.46□□□□□ -2.18
CD74P04233 GNAI2P1-201ENST00000541815 315 ntBASIC1.46□□□□□ -2.18
CD74P04233 IMMP1LP2-201ENST00000552954 492 ntBASIC1.46□□□□□ -2.18
CD74P04233 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.46□□□□□ -2.18
CD74P04233 AC006362.1-201ENST00000567392 174 ntBASIC1.46□□□□□ -2.18
CD74P04233 MIR4285-201ENST00000581001 85 ntBASIC1.46□□□□□ -2.18
CD74P04233 AC008752.3-201ENST00000588113 712 ntBASIC1.46□□□□□ -2.18
CD74P04233 AC068790.2-201ENST00000602601 557 ntBASIC1.46□□□□□ -2.18
CD74P04233 AC078795.2-201ENST00000602835 1252 ntBASIC1.46□□□□□ -2.18
CD74P04233 AC025811.1-201ENST00000604312 472 ntBASIC1.46□□□□□ -2.18
CD74P04233 Z82243.1-201ENST00000609432 473 ntBASIC1.46□□□□□ -2.18
CD74P04233 AC063943.3-201ENST00000615562 356 ntBASIC1.46□□□□□ -2.18
CD74P04233 AC007792.1-201ENST00000623023 402 ntBASIC1.46□□□□□ -2.18
CD74P04233 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
CD74P04233 RNU6-1210P-201ENST00000363775 107 ntBASIC1.45□□□□□ -2.18
CD74P04233 Y_RNA.359-201ENST00000365498 102 ntBASIC1.45□□□□□ -2.18
CD74P04233 Y_RNA.381-201ENST00000365666 102 ntBASIC1.45□□□□□ -2.18
CD74P04233 Y_RNA.553-201ENST00000384670 102 ntBASIC1.45□□□□□ -2.18
CD74P04233 RNU6-482P-201ENST00000391068 107 ntBASIC1.45□□□□□ -2.18
CD74P04233 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.45□□□□□ -2.18
CD74P04233 BTF3L4P1-201ENST00000413813 468 ntBASIC1.45□□□□□ -2.18
CD74P04233 MTATP6P18-201ENST00000417994 673 ntBASIC1.45□□□□□ -2.18
CD74P04233 MTCO2P34-201ENST00000421994 607 ntBASIC1.45□□□□□ -2.18
CD74P04233 MTCO2P16-201ENST00000436962 677 ntBASIC1.45□□□□□ -2.18
CD74P04233 PRPS1P1-201ENST00000445305 876 ntBASIC1.45□□□□□ -2.18
CD74P04233 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.45□□□□□ -2.18
CD74P04233 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.45□□□□□ -2.18
CD74P04233 AL353752.1-201ENST00000454946 260 ntBASIC1.45□□□□□ -2.18
CD74P04233 SCARNA18-201ENST00000459004 134 ntBASIC1.45□□□□□ -2.18
CD74P04233 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.45□□□□□ -2.18
CD74P04233 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.45□□□□□ -2.18
CD74P04233 AC079382.1-201ENST00000493346 557 ntBASIC1.45□□□□□ -2.18
CD74P04233 RPS29P11-201ENST00000496507 171 ntBASIC1.45□□□□□ -2.18
CD74P04233 AC010424.1-201ENST00000506336 297 ntBASIC1.45□□□□□ -2.18
CD74P04233 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.45□□□□□ -2.18
CD74P04233 RNU6-965P-201ENST00000516721 96 ntBASIC1.45□□□□□ -2.18
CD74P04233 RNU6-667P-201ENST00000517186 102 ntBASIC1.45□□□□□ -2.18
CD74P04233 MTCO2P4-201ENST00000517968 247 ntBASIC1.45□□□□□ -2.18
CD74P04233 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.45□□□□□ -2.18
CD74P04233 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.45□□□□□ -2.18
CD74P04233 AP003392.2-201ENST00000527269 208 ntBASIC1.45□□□□□ -2.18
CD74P04233 AC015712.3-201ENST00000559380 164 ntBASIC1.45□□□□□ -2.18
CD74P04233 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.45□□□□□ -2.18
CD74P04233 AC073648.5-201ENST00000603502 305 ntBASIC1.45□□□□□ -2.18
CD74P04233 AC123912.5-201ENST00000605470 343 ntBASIC1.45□□□□□ -2.18
CD74P04233 AC109347.2-201ENST00000610220 349 ntBASIC1.45□□□□□ -2.18
CD74P04233 AC009318.2-201ENST00000610917 651 ntBASIC1.45□□□□□ -2.18
CD74P04233 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
CD74P04233 AC091834.1-201ENST00000614543 472 ntBASIC1.45□□□□□ -2.18
CD74P04233 Z69720.2-201ENST00000624755 279 ntBASIC1.45□□□□□ -2.18
CD74P04233 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.45□□□□□ -2.18
CD74P04233 RNU6-944P-201ENST00000364023 107 ntBASIC1.44□□□□□ -2.18
CD74P04233 RNU6-743P-201ENST00000364151 106 ntBASIC1.44□□□□□ -2.18
CD74P04233 RNU6-606P-201ENST00000384721 111 ntBASIC1.44□□□□□ -2.18
CD74P04233 RNU6-997P-201ENST00000384725 107 ntBASIC1.44□□□□□ -2.18
CD74P04233 SNORA16.2-201ENST00000390991 127 ntBASIC1.44□□□□□ -2.18
CD74P04233 MIR1294-201ENST00000408503 142 ntBASIC1.44□□□□□ -2.18
CD74P04233 RNU2-32P-201ENST00000411193 191 ntBASIC1.44□□□□□ -2.18
CD74P04233 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.44□□□□□ -2.18
CD74P04233 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.44□□□□□ -2.18
CD74P04233 MTCYBP8-201ENST00000422855 651 ntBASIC1.44□□□□□ -2.18
CD74P04233 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CD74P04233 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.44□□□□□ -2.18
CD74P04233 AC007969.2-201ENST00000441891 191 ntBASIC1.44□□□□□ -2.18
CD74P04233 AC098826.2-201ENST00000452011 651 ntBASIC1.44□□□□□ -2.18
CD74P04233 RPL38P4-201ENST00000502376 214 ntBASIC1.44□□□□□ -2.18
CD74P04233 RNU6-377P-201ENST00000515965 102 ntBASIC1.44□□□□□ -2.18
CD74P04233 RNU2-69P-201ENST00000516061 100 ntBASIC1.44□□□□□ -2.18
CD74P04233 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.44□□□□□ -2.18
CD74P04233 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.44□□□□□ -2.18
CD74P04233 AP005435.4-201ENST00000529514 284 ntBASIC1.44□□□□□ -2.18
CD74P04233 AL356057.1-201ENST00000533798 831 ntBASIC1.44□□□□□ -2.18
CD74P04233 MIR5583-1-201ENST00000580941 59 ntBASIC1.44□□□□□ -2.18
CD74P04233 MTATP6P3-201ENST00000581686 676 ntBASIC1.44□□□□□ -2.18
CD74P04233 RSL24D1P11-201ENST00000591045 491 ntBASIC1.44□□□□□ -2.18
CD74P04233 AC110760.3-201ENST00000598794 467 ntBASIC1.44□□□□□ -2.18
CD74P04233 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.44□□□□□ -2.18
CD74P04233 AC002044.1-201ENST00000606707 158 ntBASIC1.44□□□□□ -2.18
CD74P04233 AC090582.1-201ENST00000636321 199 ntBASIC1.44□□□□□ -2.18
CD74P04233 U4.7-201ENST00000638126 106 ntBASIC1.44□□□□□ -2.18
CD74P04233 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.44□□□□□ -2.18
CD74P04233 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CD74P04233 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.44□□□□□ -2.18
CD74P04233 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CD74P04233 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.43□□□□□ -2.18
CD74P04233 MIR126-201ENST00000362291 85 ntBASIC1.43□□□□□ -2.18
CD74P04233 RNU6-552P-201ENST00000362869 119 ntBASIC1.43□□□□□ -2.18
CD74P04233 RNU6-428P-201ENST00000362942 107 ntBASIC1.43□□□□□ -2.18
CD74P04233 RNU6-1120P-201ENST00000362988 108 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms