Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VTNP04004 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.37□□□□□ -2.03
VTNP04004 RMST_7.1-201ENST00000621935 268 ntBASIC2.37□□□□□ -2.03
VTNP04004 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VTNP04004 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.36□□□□□ -2.03
VTNP04004 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
VTNP04004 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.36□□□□□ -2.03
VTNP04004 SNORD56.1-201ENST00000362913 68 ntBASIC2.36□□□□□ -2.03
VTNP04004 RNU6-428P-201ENST00000362942 107 ntBASIC2.36□□□□□ -2.03
VTNP04004 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VTNP04004 FGF7P8-201ENST00000402994 292 ntBASIC2.36□□□□□ -2.03
VTNP04004 RNA5SP181-201ENST00000410246 98 ntBASIC2.36□□□□□ -2.03
VTNP04004 AL591043.1-201ENST00000432461 424 ntBASIC2.36□□□□□ -2.03
VTNP04004 MTND3P10-201ENST00000450967 341 ntBASIC2.36□□□□□ -2.03
VTNP04004 PPP1R2P5-201ENST00000457256 603 ntBASIC2.36□□□□□ -2.03
VTNP04004 PMCHL2-203ENST00000457791 237 ntBASIC2.36□□□□□ -2.03
VTNP04004 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.36□□□□□ -2.03
VTNP04004 RPL7P43-201ENST00000478876 753 ntBASIC2.36□□□□□ -2.03
VTNP04004 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.36□□□□□ -2.03
VTNP04004 SNORA25.11-201ENST00000515935 105 ntBASIC2.36□□□□□ -2.03
VTNP04004 RPPH1-2P-201ENST00000516688 293 ntBASIC2.36□□□□□ -2.03
VTNP04004 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.36□□□□□ -2.03
VTNP04004 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.36□□□□□ -2.03
VTNP04004 AL356280.1-201ENST00000603614 379 ntBASIC2.36□□□□□ -2.03
VTNP04004 AL670379.10-201ENST00000604330 253 ntBASIC2.36□□□□□ -2.03
VTNP04004 AL670379.9-201ENST00000605428 253 ntBASIC2.36□□□□□ -2.03
VTNP04004 AL121917.1-203ENST00000605534 577 ntBASIC2.36□□□□□ -2.03
VTNP04004 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.36□□□□□ -2.03
VTNP04004 MIR219B-201ENST00000637023 88 ntBASIC2.36□□□□□ -2.03
VTNP04004 AC080128.1-201ENST00000474389 1917 ntBASIC2.36□□□□□ -2.03
VTNP04004 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
VTNP04004 AC080100.1-201ENST00000624239 5356 ntBASIC2.35□□□□□ -2.03
VTNP04004 RNA5SP432-201ENST00000362480 116 ntBASIC2.35□□□□□ -2.03
VTNP04004 Y_RNA.72-201ENST00000362894 103 ntBASIC2.35□□□□□ -2.03
VTNP04004 VTRNA1-1-201ENST00000363120 99 ntBASIC2.35□□□□□ -2.03
VTNP04004 SNORA72.1-201ENST00000363485 129 ntBASIC2.35□□□□□ -2.03
VTNP04004 Y_RNA.303-201ENST00000364998 94 ntBASIC2.35□□□□□ -2.03
VTNP04004 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VTNP04004 RNU1-109P-201ENST00000383960 147 ntBASIC2.35□□□□□ -2.03
VTNP04004 RNU6-767P-201ENST00000384132 107 ntBASIC2.35□□□□□ -2.03
VTNP04004 RNU6-1013P-201ENST00000384180 107 ntBASIC2.35□□□□□ -2.03
VTNP04004 RNU6-1106P-201ENST00000390845 107 ntBASIC2.35□□□□□ -2.03
VTNP04004 RNU6-510P-201ENST00000391239 108 ntBASIC2.35□□□□□ -2.03
VTNP04004 RPL19P1-201ENST00000411635 428 ntBASIC2.35□□□□□ -2.03
VTNP04004 AC138623.1-201ENST00000418060 216 ntBASIC2.35□□□□□ -2.03
VTNP04004 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.35□□□□□ -2.03
VTNP04004 IFNA20P-201ENST00000436840 528 ntBASIC2.35□□□□□ -2.03
VTNP04004 AC004383.1-201ENST00000438135 289 ntBASIC2.35□□□□□ -2.03
VTNP04004 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.35□□□□□ -2.03
VTNP04004 MTCO3P18-201ENST00000440206 761 ntBASIC2.35□□□□□ -2.03
VTNP04004 AL359672.1-201ENST00000442302 409 ntBASIC2.35□□□□□ -2.03
VTNP04004 AP001324.2-201ENST00000461163 319 ntBASIC2.35□□□□□ -2.03
VTNP04004 MED28P2-201ENST00000475771 317 ntBASIC2.35□□□□□ -2.03
VTNP04004 TRBVA-201ENST00000498804 316 ntBASIC2.35□□□□□ -2.03
VTNP04004 AC092436.3-201ENST00000511788 257 ntBASIC2.35□□□□□ -2.03
VTNP04004 RNU6-256P-201ENST00000516747 97 ntBASIC2.35□□□□□ -2.03
VTNP04004 SNORA31.15-201ENST00000516771 132 ntBASIC2.35□□□□□ -2.03
VTNP04004 AP005597.4-201ENST00000526762 229 ntBASIC2.35□□□□□ -2.03
VTNP04004 AP000889.2-201ENST00000532684 490 ntBASIC2.35□□□□□ -2.03
VTNP04004 AC010186.2-204ENST00000537668 439 ntBASIC2.35□□□□□ -2.03
VTNP04004 AC026371.1-201ENST00000551867 419 ntBASIC2.35□□□□□ -2.03
VTNP04004 AL121579.1-201ENST00000555129 305 ntBASIC2.35□□□□□ -2.03
VTNP04004 MIR3672-201ENST00000584290 82 ntBASIC2.35□□□□□ -2.03
VTNP04004 RPL23AP88-201ENST00000605759 454 ntBASIC2.35□□□□□ -2.03
VTNP04004 AL137847.3-201ENST00000611521 109 ntBASIC2.35□□□□□ -2.03
VTNP04004 AC104237.2-201ENST00000612456 443 ntBASIC2.35□□□□□ -2.03
VTNP04004 DUXAP9-208ENST00000622815 614 ntBASIC2.35□□□□□ -2.03
VTNP04004 ZNF271P-202ENST00000465539 1970 ntBASIC2.35□□□□□ -2.03
VTNP04004 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.35□□□□□ -2.03
VTNP04004 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.34□□□□□ -2.03
VTNP04004 AC135776.4-201ENST00000624300 1904 ntBASIC2.34□□□□□ -2.03
VTNP04004 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
VTNP04004 MTND5P30-201ENST00000452896 1731 ntBASIC2.34□□□□□ -2.03
VTNP04004 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.34□□□□□ -2.03
VTNP04004 RNU1-138P-201ENST00000384093 164 ntBASIC2.34□□□□□ -2.03
VTNP04004 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.34□□□□□ -2.03
VTNP04004 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.34□□□□□ -2.03
VTNP04004 AC098614.3-201ENST00000438957 440 ntBASIC2.34□□□□□ -2.03
VTNP04004 MTND4P18-201ENST00000447010 465 ntBASIC2.34□□□□□ -2.03
VTNP04004 SNRPGP7-201ENST00000469016 106 ntBASIC2.34□□□□□ -2.03
VTNP04004 AP000852.1-201ENST00000472460 573 ntBASIC2.34□□□□□ -2.03
VTNP04004 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.34□□□□□ -2.03
VTNP04004 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.34□□□□□ -2.03
VTNP04004 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.34□□□□□ -2.03
VTNP04004 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.34□□□□□ -2.03
VTNP04004 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.34□□□□□ -2.03
VTNP04004 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.34□□□□□ -2.03
VTNP04004 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.34□□□□□ -2.03
VTNP04004 AC005668.1-201ENST00000571142 476 ntBASIC2.34□□□□□ -2.03
VTNP04004 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.34□□□□□ -2.03
VTNP04004 ELOCP5-201ENST00000604924 333 ntBASIC2.34□□□□□ -2.03
VTNP04004 AC064836.2-201ENST00000609491 462 ntBASIC2.34□□□□□ -2.03
VTNP04004 uc_338.14-201ENST00000613162 166 ntBASIC2.34□□□□□ -2.03
VTNP04004 FAM157A-202ENST00000615155 405 ntBASIC2.34□□□□□ -2.03
VTNP04004 U4.7-201ENST00000638126 106 ntBASIC2.34□□□□□ -2.03
VTNP04004 RBBP8P1-201ENST00000449447 1844 ntBASIC2.33□□□□□ -2.04
VTNP04004 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VTNP04004 RNU6-293P-201ENST00000411259 106 ntBASIC2.33□□□□□ -2.04
VTNP04004 AC074117.2-201ENST00000417130 397 ntBASIC2.33□□□□□ -2.04
VTNP04004 MICF-203ENST00000432679 129 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms