Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MIR1273D-201ENST00000577266 86 ntBASIC2.67□□□□□ -1.98
MBD4O95243 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
MBD4O95243 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.67□□□□□ -1.98
MBD4O95243 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.67□□□□□ -1.98
MBD4O95243 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
MBD4O95243 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
MBD4O95243 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
MBD4O95243 RNU1-23P-201ENST00000363361 144 ntBASIC2.66□□□□□ -1.98
MBD4O95243 RNU6-43P-201ENST00000384302 107 ntBASIC2.66□□□□□ -1.98
MBD4O95243 RNU6-1274P-201ENST00000384557 107 ntBASIC2.66□□□□□ -1.98
MBD4O95243 ERLEC1P1-201ENST00000433806 578 ntBASIC2.66□□□□□ -1.98
MBD4O95243 AL353705.4-201ENST00000449661 238 ntBASIC2.66□□□□□ -1.98
MBD4O95243 AL353752.1-201ENST00000454946 260 ntBASIC2.66□□□□□ -1.98
MBD4O95243 AC091435.1-201ENST00000505442 584 ntBASIC2.66□□□□□ -1.98
MBD4O95243 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.66□□□□□ -1.98
MBD4O95243 RNU6-323P-201ENST00000521915 107 ntBASIC2.66□□□□□ -1.98
MBD4O95243 AC016957.1-201ENST00000534895 309 ntBASIC2.66□□□□□ -1.98
MBD4O95243 AC078814.3-201ENST00000553036 491 ntBASIC2.66□□□□□ -1.98
MBD4O95243 AC026464.5-201ENST00000562497 722 ntBASIC2.66□□□□□ -1.98
MBD4O95243 MIR3126-201ENST00000577443 74 ntBASIC2.66□□□□□ -1.98
MBD4O95243 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.66□□□□□ -1.98
MBD4O95243 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
MBD4O95243 AL357078.3-201ENST00000607528 618 ntBASIC2.66□□□□□ -1.98
MBD4O95243 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.66□□□□□ -1.98
MBD4O95243 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
MBD4O95243 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
MBD4O95243 MIR6873-201ENST00000622788 63 ntBASIC2.66□□□□□ -1.98
MBD4O95243 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.66□□□□□ -1.98
MBD4O95243 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.65□□□□□ -1.98
MBD4O95243 Y_RNA.3-201ENST00000362331 103 ntBASIC2.65□□□□□ -1.99
MBD4O95243 Y_RNA.9-201ENST00000362354 101 ntBASIC2.65□□□□□ -1.99
MBD4O95243 snoU2_19.1-201ENST00000362361 80 ntBASIC2.65□□□□□ -1.99
MBD4O95243 SNORA3A-201ENST00000364113 130 ntBASIC2.65□□□□□ -1.99
MBD4O95243 AF274854.1-201ENST00000413236 615 ntBASIC2.65□□□□□ -1.99
MBD4O95243 MTND1P34-201ENST00000438556 671 ntBASIC2.65□□□□□ -1.99
MBD4O95243 IFNA11P-201ENST00000446352 526 ntBASIC2.65□□□□□ -1.99
MBD4O95243 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.65□□□□□ -1.99
MBD4O95243 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.65□□□□□ -1.99
MBD4O95243 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.65□□□□□ -1.99
MBD4O95243 RNU5F-2P-201ENST00000516066 82 ntBASIC2.65□□□□□ -1.99
MBD4O95243 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.65□□□□□ -1.99
MBD4O95243 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.65□□□□□ -1.99
MBD4O95243 MYL12BP1-201ENST00000569826 507 ntBASIC2.65□□□□□ -1.99
MBD4O95243 MIR3136-201ENST00000583498 78 ntBASIC2.65□□□□□ -1.99
MBD4O95243 RNU6-89P-201ENST00000606519 100 ntBASIC2.65□□□□□ -1.99
MBD4O95243 AL137847.3-201ENST00000611521 109 ntBASIC2.65□□□□□ -1.99
MBD4O95243 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.65□□□□□ -1.99
MBD4O95243 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
MBD4O95243 RNY3P3-201ENST00000363816 102 ntBASIC2.64□□□□□ -1.99
MBD4O95243 Y_RNA.402-201ENST00000383972 102 ntBASIC2.64□□□□□ -1.99
MBD4O95243 RN7SKP61-201ENST00000410642 295 ntBASIC2.64□□□□□ -1.99
MBD4O95243 MTCO1P20-201ENST00000425366 358 ntBASIC2.64□□□□□ -1.99
MBD4O95243 AC244670.1-201ENST00000436879 112 ntBASIC2.64□□□□□ -1.99
MBD4O95243 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
MBD4O95243 AC096638.1-201ENST00000444678 216 ntBASIC2.64□□□□□ -1.99
MBD4O95243 AC011753.1-201ENST00000451001 220 ntBASIC2.64□□□□□ -1.99
MBD4O95243 RPS29P21-201ENST00000496272 170 ntBASIC2.64□□□□□ -1.99
MBD4O95243 HMGB3P3-201ENST00000510526 400 ntBASIC2.64□□□□□ -1.99
MBD4O95243 AP000763.2-201ENST00000540641 163 ntBASIC2.64□□□□□ -1.99
MBD4O95243 AC018630.3-201ENST00000542637 96 ntBASIC2.64□□□□□ -1.99
MBD4O95243 SNRPGP18-201ENST00000553000 214 ntBASIC2.64□□□□□ -1.99
MBD4O95243 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.64□□□□□ -1.99
MBD4O95243 AC009127.3-201ENST00000570531 403 ntBASIC2.64□□□□□ -1.99
MBD4O95243 MIR5692C1-201ENST00000585309 91 ntBASIC2.64□□□□□ -1.99
MBD4O95243 AL034555.1-201ENST00000604816 211 ntBASIC2.64□□□□□ -1.99
MBD4O95243 ELOCP5-201ENST00000604924 333 ntBASIC2.64□□□□□ -1.99
MBD4O95243 AC018889.1-201ENST00000605372 397 ntBASIC2.64□□□□□ -1.99
MBD4O95243 AL121757.2-201ENST00000611223 313 ntBASIC2.64□□□□□ -1.99
MBD4O95243 U4.5-201ENST00000617137 123 ntBASIC2.64□□□□□ -1.99
MBD4O95243 AC009831.4-201ENST00000620744 325 ntBASIC2.64□□□□□ -1.99
MBD4O95243 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
MBD4O95243 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
MBD4O95243 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
MBD4O95243 SNORA80E-201ENST00000384744 137 ntBASIC2.63□□□□□ -1.99
MBD4O95243 SNORD73A-201ENST00000386062 65 ntBASIC2.63□□□□□ -1.99
MBD4O95243 RNA5SP270-201ENST00000411361 118 ntBASIC2.63□□□□□ -1.99
MBD4O95243 HMGB3P2-201ENST00000411913 584 ntBASIC2.63□□□□□ -1.99
MBD4O95243 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.63□□□□□ -1.99
MBD4O95243 AC078809.1-201ENST00000427601 140 ntBASIC2.63□□□□□ -1.99
MBD4O95243 AL359672.1-201ENST00000442302 409 ntBASIC2.63□□□□□ -1.99
MBD4O95243 RNU6-1037P-201ENST00000459571 107 ntBASIC2.63□□□□□ -1.99
MBD4O95243 SNRPGP7-201ENST00000469016 106 ntBASIC2.63□□□□□ -1.99
MBD4O95243 HMGB1P35-201ENST00000503360 598 ntBASIC2.63□□□□□ -1.99
MBD4O95243 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.63□□□□□ -1.99
MBD4O95243 IGLV3-17-201ENST00000519099 244 ntBASIC2.63□□□□□ -1.99
MBD4O95243 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.63□□□□□ -1.99
MBD4O95243 AC034114.1-201ENST00000520293 285 ntBASIC2.63□□□□□ -1.99
MBD4O95243 AP005597.4-201ENST00000526762 229 ntBASIC2.63□□□□□ -1.99
MBD4O95243 AC121758.2-201ENST00000553271 193 ntBASIC2.63□□□□□ -1.99
MBD4O95243 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.63□□□□□ -1.99
MBD4O95243 AC010525.2-201ENST00000590920 195 ntBASIC2.63□□□□□ -1.99
MBD4O95243 AP001836.1-201ENST00000604675 523 ntBASIC2.63□□□□□ -1.99
MBD4O95243 AC068137.4-201ENST00000638485 296 ntBASIC2.63□□□□□ -1.99
MBD4O95243 AC092268.1-201ENST00000342691 405 ntBASIC2.62□□□□□ -1.99
MBD4O95243 RNU6-522P-201ENST00000364497 107 ntBASIC2.62□□□□□ -1.99
MBD4O95243 RNU4-56P-201ENST00000364700 142 ntBASIC2.62□□□□□ -1.99
MBD4O95243 SNORD32A-201ENST00000364805 84 ntBASIC2.62□□□□□ -1.99
MBD4O95243 RNU6-546P-201ENST00000383991 107 ntBASIC2.62□□□□□ -1.99
MBD4O95243 SNORA64-201ENST00000384674 134 ntBASIC2.62□□□□□ -1.99
MBD4O95243 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms