Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 HSPE1P4-201ENST00000550617 308 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 MIR5695-201ENST00000579717 85 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 AC005296.1-201ENST00000616145 209 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 AC004825.2-201ENST00000616634 455 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTCD1O75127 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTCD1O75127 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTCD1O75127 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.62□□□□□ -1.67
PTCD1O75127 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTCD1O75127 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PTCD1O75127 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PTCD1O75127 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PTCD1O75127 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PTCD1O75127 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PTCD1O75127 RBBP8P1-201ENST00000449447 1844 ntBASIC4.61□□□□□ -1.67
PTCD1O75127 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.61□□□□□ -1.67
PTCD1O75127 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PTCD1O75127 RNU6-1035P-201ENST00000384477 107 ntBASIC4.61□□□□□ -1.67
PTCD1O75127 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PTCD1O75127 RNU1-139P-201ENST00000391307 165 ntBASIC4.61□□□□□ -1.67
PTCD1O75127 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.61□□□□□ -1.67
PTCD1O75127 AC007969.2-201ENST00000441891 191 ntBASIC4.61□□□□□ -1.67
PTCD1O75127 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.61□□□□□ -1.67
PTCD1O75127 U3.44-201ENST00000458938 192 ntBASIC4.61□□□□□ -1.67
PTCD1O75127 AC097462.2-201ENST00000504623 481 ntBASIC4.61□□□□□ -1.67
PTCD1O75127 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.61□□□□□ -1.67
PTCD1O75127 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.61□□□□□ -1.67
PTCD1O75127 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.61□□□□□ -1.67
PTCD1O75127 SNORA43.4-201ENST00000629559 138 ntBASIC4.61□□□□□ -1.67
PTCD1O75127 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PTCD1O75127 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PTCD1O75127 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
PTCD1O75127 AC007656.2-201ENST00000624902 4547 ntBASIC4.61□□□□□ -1.67
PTCD1O75127 AL079305.1-201ENST00000623159 3008 ntBASIC4.61□□□□□ -1.67
PTCD1O75127 MAPK10-253ENST00000641010 4072 ntBASIC4.61□□□□□ -1.67
PTCD1O75127 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PTCD1O75127 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTCD1O75127 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PTCD1O75127 ADAM3A-203ENST00000461344 2157 ntBASIC4.6□□□□□ -1.67
PTCD1O75127 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
PTCD1O75127 Y_RNA.111-201ENST00000363248 100 ntBASIC4.6□□□□□ -1.67
PTCD1O75127 Y_RNA.319-201ENST00000365138 92 ntBASIC4.6□□□□□ -1.67
PTCD1O75127 Y_RNA.418-201ENST00000384029 102 ntBASIC4.6□□□□□ -1.67
PTCD1O75127 HLFP1-201ENST00000402375 499 ntBASIC4.6□□□□□ -1.67
PTCD1O75127 AL033519.2-201ENST00000403958 392 ntBASIC4.6□□□□□ -1.67
PTCD1O75127 MTHFD2P2-201ENST00000407725 247 ntBASIC4.6□□□□□ -1.67
PTCD1O75127 Y_RNA.629-201ENST00000411368 105 ntBASIC4.6□□□□□ -1.67
PTCD1O75127 RPL23AP95-201ENST00000426806 265 ntBASIC4.6□□□□□ -1.67
PTCD1O75127 WARS2P1-201ENST00000429678 537 ntBASIC4.6□□□□□ -1.67
PTCD1O75127 CR769767.1-201ENST00000436337 346 ntBASIC4.6□□□□□ -1.67
PTCD1O75127 SNORA59A-201ENST00000459326 152 ntBASIC4.6□□□□□ -1.67
PTCD1O75127 RN7SL807P-201ENST00000470923 297 ntBASIC4.6□□□□□ -1.67
PTCD1O75127 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PTCD1O75127 NACAP3-201ENST00000552100 481 ntBASIC4.6□□□□□ -1.67
PTCD1O75127 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.6□□□□□ -1.67
PTCD1O75127 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.6□□□□□ -1.67
PTCD1O75127 AL356157.2-201ENST00000605122 111 ntBASIC4.6□□□□□ -1.67
PTCD1O75127 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.6□□□□□ -1.67
PTCD1O75127 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.6□□□□□ -1.67
PTCD1O75127 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.6□□□□□ -1.67
PTCD1O75127 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.59□□□□□ -1.67
PTCD1O75127 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTCD1O75127 RNU4-90P-201ENST00000362773 141 ntBASIC4.59□□□□□ -1.67
PTCD1O75127 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PTCD1O75127 RNU6-417P-201ENST00000384712 107 ntBASIC4.59□□□□□ -1.67
PTCD1O75127 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.59□□□□□ -1.67
PTCD1O75127 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTCD1O75127 AC005002.2-201ENST00000438228 269 ntBASIC4.59□□□□□ -1.67
PTCD1O75127 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
PTCD1O75127 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PTCD1O75127 AP006245.1-201ENST00000522549 120 ntBASIC4.59□□□□□ -1.67
PTCD1O75127 UBL5P4-201ENST00000562584 236 ntBASIC4.59□□□□□ -1.67
PTCD1O75127 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.59□□□□□ -1.67
PTCD1O75127 MIR4308-201ENST00000580634 81 ntBASIC4.59□□□□□ -1.67
PTCD1O75127 AL162424.1-201ENST00000602325 221 ntBASIC4.59□□□□□ -1.67
PTCD1O75127 YPEL5P2-201ENST00000605553 359 ntBASIC4.59□□□□□ -1.67
PTCD1O75127 MIR7112-201ENST00000616126 65 ntBASIC4.59□□□□□ -1.67
PTCD1O75127 AC073308.1-201ENST00000623696 305 ntBASIC4.59□□□□□ -1.67
PTCD1O75127 IGHVIII-44-202ENST00000636235 289 ntBASIC4.59□□□□□ -1.67
PTCD1O75127 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.59□□□□□ -1.67
PTCD1O75127 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTCD1O75127 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
PTCD1O75127 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.59□□□□□ -1.68
PTCD1O75127 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.58□□□□□ -1.68
PTCD1O75127 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PTCD1O75127 RNU5B-2P-201ENST00000363036 113 ntBASIC4.58□□□□□ -1.68
PTCD1O75127 SNORA38.1-201ENST00000364172 131 ntBASIC4.58□□□□□ -1.68
PTCD1O75127 Y_RNA.497-201ENST00000384447 98 ntBASIC4.58□□□□□ -1.68
PTCD1O75127 MIR487A-201ENST00000385009 80 ntBASIC4.58□□□□□ -1.68
PTCD1O75127 MIR634-201ENST00000385208 97 ntBASIC4.58□□□□□ -1.68
PTCD1O75127 RPL23AP36-201ENST00000413895 458 ntBASIC4.58□□□□□ -1.68
PTCD1O75127 AC099548.1-201ENST00000421443 426 ntBASIC4.58□□□□□ -1.68
PTCD1O75127 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.58□□□□□ -1.68
PTCD1O75127 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.58□□□□□ -1.68
PTCD1O75127 RPS4XP22-201ENST00000480755 780 ntBASIC4.58□□□□□ -1.68
PTCD1O75127 RNA5SP272-201ENST00000516095 111 ntBASIC4.58□□□□□ -1.68
PTCD1O75127 RNA5SP154-201ENST00000516193 111 ntBASIC4.58□□□□□ -1.68
PTCD1O75127 AC011602.1-201ENST00000546484 331 ntBASIC4.58□□□□□ -1.68
PTCD1O75127 AC027288.2-201ENST00000553028 243 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms