Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.54□□□□□ -2
LMX1BO60663 AMZ2P1-203ENST00000565833 850 ntBASIC2.54□□□□□ -2
LMX1BO60663 MIR5701-3-201ENST00000578890 82 ntBASIC2.54□□□□□ -2
LMX1BO60663 AC113195.1-201ENST00000579952 141 ntBASIC2.54□□□□□ -2
LMX1BO60663 MIR5701-1-201ENST00000585138 82 ntBASIC2.54□□□□□ -2
LMX1BO60663 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.54□□□□□ -2
LMX1BO60663 MIR5701-2-201ENST00000615634 82 ntBASIC2.54□□□□□ -2
LMX1BO60663 AP003122.5-201ENST00000527668 3766 ntBASIC2.54□□□□□ -2
LMX1BO60663 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LMX1BO60663 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.54□□□□□ -2
LMX1BO60663 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LMX1BO60663 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.53□□□□□ -2
LMX1BO60663 GABRG2-229ENST00000641017 3628 ntBASIC2.53□□□□□ -2
LMX1BO60663 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.53□□□□□ -2
LMX1BO60663 RNU6-78P-201ENST00000362897 107 ntBASIC2.53□□□□□ -2
LMX1BO60663 RNU6-336P-201ENST00000364891 107 ntBASIC2.53□□□□□ -2
LMX1BO60663 Y_RNA.557-201ENST00000384680 107 ntBASIC2.53□□□□□ -2
LMX1BO60663 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.53□□□□□ -2
LMX1BO60663 BMS1P22-201ENST00000414726 313 ntBASIC2.53□□□□□ -2
LMX1BO60663 RPL21P40-201ENST00000428586 483 ntBASIC2.53□□□□□ -2
LMX1BO60663 MTCYBP9-201ENST00000431021 303 ntBASIC2.53□□□□□ -2
LMX1BO60663 AL353997.1-201ENST00000432936 108 ntBASIC2.53□□□□□ -2
LMX1BO60663 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.53□□□□□ -2
LMX1BO60663 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.53□□□□□ -2
LMX1BO60663 MTATP6P7-201ENST00000453315 681 ntBASIC2.53□□□□□ -2
LMX1BO60663 AC079354.2-201ENST00000453523 154 ntBASIC2.53□□□□□ -2
LMX1BO60663 AL353752.1-201ENST00000454946 260 ntBASIC2.53□□□□□ -2
LMX1BO60663 AC128713.1-201ENST00000471495 306 ntBASIC2.53□□□□□ -2
LMX1BO60663 MTCO2P24-201ENST00000515611 426 ntBASIC2.53□□□□□ -2
LMX1BO60663 RNU6-307P-201ENST00000516743 106 ntBASIC2.53□□□□□ -2
LMX1BO60663 AC109479.2-201ENST00000517842 174 ntBASIC2.53□□□□□ -2
LMX1BO60663 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.53□□□□□ -2
LMX1BO60663 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.53□□□□□ -2
LMX1BO60663 AC018889.1-201ENST00000605372 397 ntBASIC2.53□□□□□ -2
LMX1BO60663 AC004832.5-201ENST00000608677 401 ntBASIC2.53□□□□□ -2
LMX1BO60663 MIR8076-201ENST00000611401 83 ntBASIC2.53□□□□□ -2
LMX1BO60663 7SK.10-201ENST00000621414 298 ntBASIC2.53□□□□□ -2
LMX1BO60663 AL606534.2-204ENST00000635008 178 ntBASIC2.53□□□□□ -2
LMX1BO60663 MIR4272-201ENST00000635924 64 ntBASIC2.53□□□□□ -2
LMX1BO60663 AC108206.1-201ENST00000570186 4159 ntBASIC2.53□□□□□ -2
LMX1BO60663 AC090740.1-201ENST00000623193 2262 ntBASIC2.53□□□□□ -2
LMX1BO60663 AC005592.1-201ENST00000566527 1640 ntBASIC2.53□□□□□ -2
LMX1BO60663 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.52□□□□□ -2.01
LMX1BO60663 AL136360.1-201ENST00000503377 1900 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 CDC27P3-201ENST00000635418 1910 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LMX1BO60663 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.52□□□□□ -2.01
LMX1BO60663 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 RNU6-50P-201ENST00000362356 103 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 RNY1P16-201ENST00000363063 111 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 RNU6-595P-201ENST00000363944 107 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 RNY3P11-201ENST00000364153 102 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 RNU1-73P-201ENST00000383971 164 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 Y_RNA.577-201ENST00000384794 101 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 RNU6-823P-201ENST00000391042 103 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 AL590004.2-201ENST00000404787 371 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 RNU6-1156P-201ENST00000410365 100 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.52□□□□□ -2.01
LMX1BO60663 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LMX1BO60663 RPL23AP50-201ENST00000434149 455 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.52□□□□□ -2.01
LMX1BO60663 RPS29P20-201ENST00000489592 171 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 AC083906.5-201ENST00000503722 328 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 SCGB1D5P-201ENST00000515134 247 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 ACA59.1-201ENST00000515966 143 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 RNU6-475P-201ENST00000516073 104 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 RNU6-928P-201ENST00000516876 104 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 RNU6-612P-201ENST00000516909 102 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 RNU6-264P-201ENST00000517134 104 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 AP005902.1-201ENST00000521358 186 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 GNAI2P1-201ENST00000541815 315 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.52□□□□□ -2.01
LMX1BO60663 MIR3671-201ENST00000580455 88 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 MIR4506-201ENST00000584693 77 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.52□□□□□ -2.01
LMX1BO60663 AC013412.1-201ENST00000610687 192 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 AL132822.1-201ENST00000617063 513 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 AC087588.2-201ENST00000617667 426 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.52□□□□□ -2.01
LMX1BO60663 U6.99-201ENST00000637524 83 ntBASIC2.52□□□□□ -2.01
LMX1BO60663 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LMX1BO60663 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.52□□□□□ -2.01
LMX1BO60663 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.52□□□□□ -2.01
LMX1BO60663 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
LMX1BO60663 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.51□□□□□ -2.01
LMX1BO60663 Y_RNA.106-201ENST00000363189 100 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 RNU6-884P-201ENST00000363889 107 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 RNU4-42P-201ENST00000364738 142 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 RNU6-898P-201ENST00000365627 104 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 Y_RNA.455-201ENST00000384230 98 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 MIR34A-201ENST00000385130 110 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 RNU1-101P-201ENST00000391171 127 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 U3.37-201ENST00000408528 213 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 RNA5SP184-201ENST00000411071 108 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.51□□□□□ -2.01
LMX1BO60663 EIF4EP2-201ENST00000422816 654 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 RPS15AP10-201ENST00000432472 382 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 AC099799.1-201ENST00000439809 192 ntBASIC2.51□□□□□ -2.01
LMX1BO60663 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms