Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 IFNA20P-201ENST00000436840 528 ntBASIC2.4□□□□□ -2.03
SSX4O60224 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.4□□□□□ -2.03
SSX4O60224 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.4□□□□□ -2.03
SSX4O60224 AL121594.1-201ENST00000475906 575 ntBASIC2.4□□□□□ -2.03
SSX4O60224 AC090096.1-201ENST00000489168 390 ntBASIC2.4□□□□□ -2.03
SSX4O60224 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.4□□□□□ -2.03
SSX4O60224 PRDX4P1-201ENST00000507189 574 ntBASIC2.4□□□□□ -2.03
SSX4O60224 AC008526.1-201ENST00000509149 338 ntBASIC2.4□□□□□ -2.03
SSX4O60224 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.4□□□□□ -2.03
SSX4O60224 AC025465.4-201ENST00000513422 638 ntBASIC2.4□□□□□ -2.03
SSX4O60224 RNU6-1088P-201ENST00000516850 104 ntBASIC2.4□□□□□ -2.03
SSX4O60224 RNU6-612P-201ENST00000516909 102 ntBASIC2.4□□□□□ -2.03
SSX4O60224 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.4□□□□□ -2.03
SSX4O60224 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.4□□□□□ -2.03
SSX4O60224 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.4□□□□□ -2.03
SSX4O60224 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.4□□□□□ -2.03
SSX4O60224 RPL30P11-203ENST00000598995 310 ntBASIC2.4□□□□□ -2.03
SSX4O60224 RBM11P1-201ENST00000604951 799 ntBASIC2.4□□□□□ -2.03
SSX4O60224 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SSX4O60224 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SSX4O60224 RNU4-82P-201ENST00000362443 140 ntBASIC2.39□□□□□ -2.03
SSX4O60224 RNU6-562P-201ENST00000362731 107 ntBASIC2.39□□□□□ -2.03
SSX4O60224 RNU6-1285P-201ENST00000363480 105 ntBASIC2.39□□□□□ -2.03
SSX4O60224 RNU6-1210P-201ENST00000363775 107 ntBASIC2.39□□□□□ -2.03
SSX4O60224 SNORD116-11-201ENST00000383882 92 ntBASIC2.39□□□□□ -2.03
SSX4O60224 Y_RNA.390-201ENST00000383932 102 ntBASIC2.39□□□□□ -2.03
SSX4O60224 RNU6-1013P-201ENST00000384180 107 ntBASIC2.39□□□□□ -2.03
SSX4O60224 RNU6-95P-201ENST00000384697 107 ntBASIC2.39□□□□□ -2.03
SSX4O60224 RNA5SP210-201ENST00000391034 120 ntBASIC2.39□□□□□ -2.03
SSX4O60224 RNU6-325P-201ENST00000411132 105 ntBASIC2.39□□□□□ -2.03
SSX4O60224 RNA5SP508-201ENST00000411327 119 ntBASIC2.39□□□□□ -2.03
SSX4O60224 AL030996.1-201ENST00000411430 235 ntBASIC2.39□□□□□ -2.03
SSX4O60224 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.39□□□□□ -2.03
SSX4O60224 CYCSP48-201ENST00000417124 323 ntBASIC2.39□□□□□ -2.03
SSX4O60224 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.39□□□□□ -2.03
SSX4O60224 CR769767.1-201ENST00000436337 346 ntBASIC2.39□□□□□ -2.03
SSX4O60224 MTND4LP16-201ENST00000440828 295 ntBASIC2.39□□□□□ -2.03
SSX4O60224 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.39□□□□□ -2.03
SSX4O60224 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.39□□□□□ -2.03
SSX4O60224 RNU7-187P-201ENST00000458985 68 ntBASIC2.39□□□□□ -2.03
SSX4O60224 RNU6-329P-201ENST00000459618 107 ntBASIC2.39□□□□□ -2.03
SSX4O60224 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.39□□□□□ -2.03
SSX4O60224 AC087241.2-201ENST00000535801 324 ntBASIC2.39□□□□□ -2.03
SSX4O60224 AC026464.5-201ENST00000562497 722 ntBASIC2.39□□□□□ -2.03
SSX4O60224 AC023824.2-201ENST00000566185 400 ntBASIC2.39□□□□□ -2.03
SSX4O60224 AC093249.1-201ENST00000567049 203 ntBASIC2.39□□□□□ -2.03
SSX4O60224 MIR4801-201ENST00000582704 82 ntBASIC2.39□□□□□ -2.03
SSX4O60224 AC009233.1-201ENST00000616477 371 ntBASIC2.39□□□□□ -2.03
SSX4O60224 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SSX4O60224 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.39□□□□□ -2.03
SSX4O60224 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SSX4O60224 CBX3P1-201ENST00000325243 554 ntBASIC2.38□□□□□ -2.03
SSX4O60224 RNU6-1141P-201ENST00000364520 107 ntBASIC2.38□□□□□ -2.03
SSX4O60224 Y_RNA.301-201ENST00000364990 103 ntBASIC2.38□□□□□ -2.03
SSX4O60224 RNU1-138P-201ENST00000384093 164 ntBASIC2.38□□□□□ -2.03
SSX4O60224 RN7SKP284-201ENST00000411002 343 ntBASIC2.38□□□□□ -2.03
SSX4O60224 AP000275.1-201ENST00000411943 390 ntBASIC2.38□□□□□ -2.03
SSX4O60224 MTCO3P46-201ENST00000425787 232 ntBASIC2.38□□□□□ -2.03
SSX4O60224 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.38□□□□□ -2.03
SSX4O60224 AL645568.3-201ENST00000433683 316 ntBASIC2.38□□□□□ -2.03
SSX4O60224 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.38□□□□□ -2.03
SSX4O60224 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.38□□□□□ -2.03
SSX4O60224 MTND1P11-201ENST00000456661 876 ntBASIC2.38□□□□□ -2.03
SSX4O60224 U8.21-201ENST00000459536 136 ntBASIC2.38□□□□□ -2.03
SSX4O60224 RPL30P1-201ENST00000488676 339 ntBASIC2.38□□□□□ -2.03
SSX4O60224 MTCO1P29-201ENST00000496868 288 ntBASIC2.38□□□□□ -2.03
SSX4O60224 AL117351.2-201ENST00000513571 157 ntBASIC2.38□□□□□ -2.03
SSX4O60224 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.38□□□□□ -2.03
SSX4O60224 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.38□□□□□ -2.03
SSX4O60224 MIR4446-201ENST00000578505 67 ntBASIC2.38□□□□□ -2.03
SSX4O60224 MIR4742-201ENST00000581069 85 ntBASIC2.38□□□□□ -2.03
SSX4O60224 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.38□□□□□ -2.03
SSX4O60224 AL713866.2-201ENST00000603579 219 ntBASIC2.38□□□□□ -2.03
SSX4O60224 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.38□□□□□ -2.03
SSX4O60224 DUXAP9-208ENST00000622815 614 ntBASIC2.38□□□□□ -2.03
SSX4O60224 AC099654.14-201ENST00000638599 341 ntBASIC2.38□□□□□ -2.03
SSX4O60224 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.38□□□□□ -2.03
SSX4O60224 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.37□□□□□ -2.03
SSX4O60224 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SSX4O60224 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SSX4O60224 Y_RNA.151-201ENST00000363566 112 ntBASIC2.37□□□□□ -2.03
SSX4O60224 RNA5SP125-201ENST00000364843 120 ntBASIC2.37□□□□□ -2.03
SSX4O60224 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SSX4O60224 RNU6-1032P-201ENST00000384100 107 ntBASIC2.37□□□□□ -2.03
SSX4O60224 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SSX4O60224 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SSX4O60224 MTND3P8-201ENST00000412909 339 ntBASIC2.37□□□□□ -2.03
SSX4O60224 AC003685.2-201ENST00000422795 395 ntBASIC2.37□□□□□ -2.03
SSX4O60224 MTND3P9-201ENST00000429526 346 ntBASIC2.37□□□□□ -2.03
SSX4O60224 PPP1R2P5-201ENST00000457256 603 ntBASIC2.37□□□□□ -2.03
SSX4O60224 RPS29P27-201ENST00000463711 170 ntBASIC2.37□□□□□ -2.03
SSX4O60224 AC130509.1-201ENST00000464158 433 ntBASIC2.37□□□□□ -2.03
SSX4O60224 AC091874.1-201ENST00000511402 339 ntBASIC2.37□□□□□ -2.03
SSX4O60224 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.37□□□□□ -2.03
SSX4O60224 RNU1-104P-201ENST00000517280 175 ntBASIC2.37□□□□□ -2.03
SSX4O60224 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.37□□□□□ -2.03
SSX4O60224 HSPE1P4-201ENST00000550617 308 ntBASIC2.37□□□□□ -2.03
SSX4O60224 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.37□□□□□ -2.03
SSX4O60224 CPDP1-201ENST00000579660 283 ntBASIC2.37□□□□□ -2.03
SSX4O60224 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms