Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AL359757.2-201ENST00000624309 274 ntBASIC2.64□□□□□ -1.99
ATP2A1O14983 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
ATP2A1O14983 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.63□□□□□ -1.99
ATP2A1O14983 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 RNA5SP432-201ENST00000362480 116 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 RNU6-1252P-201ENST00000363054 104 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 RNU6-527P-201ENST00000363425 104 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 Y_RNA.160-201ENST00000363677 92 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 RNU6-336P-201ENST00000364891 107 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 Y_RNA.390-201ENST00000383932 102 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 SNORA32.2-201ENST00000384049 122 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 RNU6-831P-201ENST00000384548 107 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 RNU6-1106P-201ENST00000390845 107 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 RNU6-510P-201ENST00000391239 108 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 RPS29P13-201ENST00000402041 169 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 VN1R36P-201ENST00000414936 291 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.63□□□□□ -1.99
ATP2A1O14983 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.63□□□□□ -1.99
ATP2A1O14983 UBE2V1P4-201ENST00000425374 344 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.63□□□□□ -1.99
ATP2A1O14983 AL591043.1-201ENST00000432461 424 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 MICF-203ENST00000432679 129 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 RPL7P12-201ENST00000446719 750 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 AP001025.1-201ENST00000486139 332 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.63□□□□□ -1.99
ATP2A1O14983 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.63□□□□□ -1.99
ATP2A1O14983 RNU6-1332P-201ENST00000516666 104 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 RNU6-256P-201ENST00000516747 97 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 RN7SKP256-201ENST00000517201 314 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.63□□□□□ -1.99
ATP2A1O14983 AC118273.2-201ENST00000532092 465 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 AP000889.2-201ENST00000532684 490 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.63□□□□□ -1.99
ATP2A1O14983 AC105137.2-201ENST00000569073 466 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 AC090897.2-201ENST00000581715 130 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 MIR3117-201ENST00000584034 78 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 AC011712.1-201ENST00000588959 234 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 RPS15AP11-201ENST00000594193 385 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 AL158827.2-201ENST00000602494 330 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 AC096772.1-201ENST00000609146 564 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 AC009248.2-201ENST00000619826 254 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.63□□□□□ -1.99
ATP2A1O14983 AL691447.3-201ENST00000635020 330 ntBASIC2.63□□□□□ -1.99
ATP2A1O14983 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.62□□□□□ -1.99
ATP2A1O14983 MIR21-201ENST00000362134 72 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 SNORD56.1-201ENST00000362913 68 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 RNU6-428P-201ENST00000362942 107 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 RNA5SP393-201ENST00000363423 117 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 Y_RNA.279-201ENST00000364763 95 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 RNU6-1013P-201ENST00000384180 107 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
ATP2A1O14983 RNA5SP390-201ENST00000410191 113 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 RPL21P111-201ENST00000418453 477 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 MTCO3P46-201ENST00000425787 232 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 RPS15AP10-201ENST00000432472 382 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 FABP5P14-201ENST00000437273 393 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 MTCO2P3-201ENST00000442543 421 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.62□□□□□ -1.99
ATP2A1O14983 RPL22P13-201ENST00000493291 347 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 AK3P2-201ENST00000507976 429 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 RNA5SP112-201ENST00000515937 99 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.62□□□□□ -1.99
ATP2A1O14983 AC087241.2-201ENST00000535801 324 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.62□□□□□ -1.99
ATP2A1O14983 AC103996.1-201ENST00000555468 102 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 MIR5194-201ENST00000582634 120 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 MIR4765-201ENST00000585007 77 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 AC023043.2-201ENST00000589678 1026 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 BNIP3P16-201ENST00000589779 534 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 AL138726.1-201ENST00000614873 333 ntBASIC2.62□□□□□ -1.99
ATP2A1O14983 Y_RNA.135-201ENST00000363439 95 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ATP2A1O14983 RNU6-1072P-201ENST00000384703 107 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 RNU6-443P-201ENST00000384780 107 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 AL133475.1-201ENST00000404414 305 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 RNU6-1328P-201ENST00000410938 106 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 BX276092.3-201ENST00000424182 230 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 Z98742.2-201ENST00000431564 187 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 RPS15AP28-201ENST00000435088 386 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 IFNA20P-201ENST00000436840 528 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 AC007969.2-201ENST00000441891 191 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 AC124916.1-201ENST00000444020 547 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.61□□□□□ -1.99
ATP2A1O14983 RPL36AP48-201ENST00000485521 314 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 AC018437.1-201ENST00000492214 406 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.61□□□□□ -1.99
ATP2A1O14983 RPS27P27-201ENST00000498779 255 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 AC092436.3-201ENST00000511788 257 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.61□□□□□ -1.99
ATP2A1O14983 RNU4-49P-201ENST00000516080 140 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 SNORA20.3-201ENST00000516880 132 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.61□□□□□ -1.99
ATP2A1O14983 AC104576.1-201ENST00000524225 88 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 AC079598.5-201ENST00000547460 117 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 MIR3942-201ENST00000585264 109 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 AC009314.1-201ENST00000603871 304 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 ELOCP5-201ENST00000604924 333 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 AC064836.2-201ENST00000609491 462 ntBASIC2.61□□□□□ -1.99
ATP2A1O14983 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.61□□□□□ -1.99
ATP2A1O14983 AC024581.2-201ENST00000619986 252 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms