Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AL691447.3-201ENST00000635020 330 ntBASIC1.49□□□□□ -2.17
AP3B1O00203 SNORD98-201ENST00000636377 67 ntBASIC1.49□□□□□ -2.17
AP3B1O00203 MTND5P9-201ENST00000503854 1755 ntBASIC1.49□□□□□ -2.17
AP3B1O00203 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.48□□□□□ -2.17
AP3B1O00203 RNU4-15P-201ENST00000362613 141 ntBASIC1.48□□□□□ -2.17
AP3B1O00203 MIR1261-201ENST00000408659 82 ntBASIC1.48□□□□□ -2.17
AP3B1O00203 MTCO3P41-201ENST00000414801 328 ntBASIC1.48□□□□□ -2.17
AP3B1O00203 OR6C66P-201ENST00000414917 930 ntBASIC1.48□□□□□ -2.17
AP3B1O00203 RPL21P111-201ENST00000418453 477 ntBASIC1.48□□□□□ -2.17
AP3B1O00203 RPL30P13-201ENST00000418873 348 ntBASIC1.48□□□□□ -2.17
AP3B1O00203 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.48□□□□□ -2.17
AP3B1O00203 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.48□□□□□ -2.17
AP3B1O00203 AC010095.1-201ENST00000443543 144 ntBASIC1.48□□□□□ -2.17
AP3B1O00203 AC099513.1-201ENST00000490423 301 ntBASIC1.48□□□□□ -2.17
AP3B1O00203 AC104806.1-201ENST00000508720 308 ntBASIC1.48□□□□□ -2.17
AP3B1O00203 AC074344.1-201ENST00000512823 224 ntBASIC1.48□□□□□ -2.17
AP3B1O00203 MIR449C-201ENST00000516047 92 ntBASIC1.48□□□□□ -2.17
AP3B1O00203 AC087883.1-201ENST00000551882 391 ntBASIC1.48□□□□□ -2.17
AP3B1O00203 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.48□□□□□ -2.17
AP3B1O00203 SUB1P3-201ENST00000564581 315 ntBASIC1.48□□□□□ -2.17
AP3B1O00203 AL050303.3-201ENST00000613704 284 ntBASIC1.48□□□□□ -2.17
AP3B1O00203 AL133173.2-201ENST00000614270 90 ntBASIC1.48□□□□□ -2.17
AP3B1O00203 AL121890.5-201ENST00000620848 304 ntBASIC1.48□□□□□ -2.17
AP3B1O00203 AC097372.5-201ENST00000623665 376 ntBASIC1.48□□□□□ -2.17
AP3B1O00203 Z69720.2-201ENST00000624755 279 ntBASIC1.48□□□□□ -2.17
AP3B1O00203 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
AP3B1O00203 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
AP3B1O00203 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
AP3B1O00203 AC245060.5-201ENST00000610778 3293 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
AP3B1O00203 SNORD33-201ENST00000362761 85 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 RNU6-271P-201ENST00000363858 105 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 RNU6-105P-201ENST00000363909 104 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 RNU6-438P-201ENST00000365561 103 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 RNU6-116P-201ENST00000384042 109 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 SNORD26-201ENST00000384147 75 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 SNORA12-201ENST00000391162 147 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 CYCSP49-201ENST00000420810 319 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 Z99497.1-201ENST00000421282 135 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 SDAD1P3-201ENST00000427380 333 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.47□□□□□ -2.17
AP3B1O00203 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.47□□□□□ -2.17
AP3B1O00203 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.47□□□□□ -2.17
AP3B1O00203 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.47□□□□□ -2.17
AP3B1O00203 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.47□□□□□ -2.17
AP3B1O00203 ART2BP-201ENST00000453501 499 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 RPS26P55-201ENST00000471178 356 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 AC097473.1-201ENST00000508142 408 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 RNU6-1129P-201ENST00000515964 104 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 SNORD60.2-201ENST00000516883 86 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 AL160236.1-201ENST00000556317 195 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 HMGB1P33-201ENST00000563485 527 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.47□□□□□ -2.17
AP3B1O00203 AC234772.3-201ENST00000602277 528 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 AC025811.1-201ENST00000604312 472 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 AC024933.1-201ENST00000608472 348 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.47□□□□□ -2.17
AP3B1O00203 MTND5P17-201ENST00000418405 1603 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 MTND4P4-201ENST00000439033 1366 ntBASIC1.47□□□□□ -2.17
AP3B1O00203 RNU6-60P-201ENST00000364792 103 ntBASIC1.46□□□□□ -2.18
AP3B1O00203 RNU6-45P-201ENST00000384471 107 ntBASIC1.46□□□□□ -2.18
AP3B1O00203 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
AP3B1O00203 AL121890.1-201ENST00000435457 205 ntBASIC1.46□□□□□ -2.18
AP3B1O00203 AC073614.1-201ENST00000438690 650 ntBASIC1.46□□□□□ -2.18
AP3B1O00203 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.46□□□□□ -2.18
AP3B1O00203 JTBP1-201ENST00000441314 247 ntBASIC1.46□□□□□ -2.18
AP3B1O00203 RPL31P3-201ENST00000458430 332 ntBASIC1.46□□□□□ -2.18
AP3B1O00203 RPL9P9-202ENST00000466501 579 ntBASIC1.46□□□□□ -2.18
AP3B1O00203 FO393415.2-201ENST00000480085 343 ntBASIC1.46□□□□□ -2.18
AP3B1O00203 RNU6-377P-201ENST00000515965 102 ntBASIC1.46□□□□□ -2.18
AP3B1O00203 Vault.3-201ENST00000516676 95 ntBASIC1.46□□□□□ -2.18
AP3B1O00203 MIR548AB-201ENST00000584917 84 ntBASIC1.46□□□□□ -2.18
AP3B1O00203 AL590229.1-201ENST00000603497 542 ntBASIC1.46□□□□□ -2.18
AP3B1O00203 AC090578.1-201ENST00000604955 591 ntBASIC1.46□□□□□ -2.18
AP3B1O00203 AC104073.3-201ENST00000610942 955 ntBASIC1.46□□□□□ -2.18
AP3B1O00203 ICE2P2-201ENST00000483823 2787 ntBASIC1.45□□□□□ -2.18
AP3B1O00203 Y_RNA.255-201ENST00000364581 97 ntBASIC1.45□□□□□ -2.18
AP3B1O00203 Y_RNA.367-201ENST00000365544 101 ntBASIC1.45□□□□□ -2.18
AP3B1O00203 RNU6-360P-201ENST00000390944 104 ntBASIC1.45□□□□□ -2.18
AP3B1O00203 RNU6-550P-201ENST00000391057 101 ntBASIC1.45□□□□□ -2.18
AP3B1O00203 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.45□□□□□ -2.18
AP3B1O00203 AC013410.2-201ENST00000422627 201 ntBASIC1.45□□□□□ -2.18
AP3B1O00203 AL354695.1-201ENST00000427935 228 ntBASIC1.45□□□□□ -2.18
AP3B1O00203 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.45□□□□□ -2.18
AP3B1O00203 SNRPGP13-201ENST00000442212 177 ntBASIC1.45□□□□□ -2.18
AP3B1O00203 RPS27AP8-201ENST00000452665 445 ntBASIC1.45□□□□□ -2.18
AP3B1O00203 MTCYBP1-201ENST00000454315 1119 ntBASIC1.45□□□□□ -2.18
AP3B1O00203 RNA5SP269-201ENST00000459032 137 ntBASIC1.45□□□□□ -2.18
AP3B1O00203 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.45□□□□□ -2.18
AP3B1O00203 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.45□□□□□ -2.18
AP3B1O00203 AC104136.1-201ENST00000512969 394 ntBASIC1.45□□□□□ -2.18
AP3B1O00203 AC109479.2-201ENST00000517842 174 ntBASIC1.45□□□□□ -2.18
AP3B1O00203 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.45□□□□□ -2.18
AP3B1O00203 AP001372.4-201ENST00000524889 472 ntBASIC1.45□□□□□ -2.18
AP3B1O00203 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.45□□□□□ -2.18
AP3B1O00203 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.45□□□□□ -2.18
AP3B1O00203 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.45□□□□□ -2.18
AP3B1O00203 AC090616.2-202ENST00000584248 222 ntBASIC1.45□□□□□ -2.18
AP3B1O00203 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
AP3B1O00203 MIR8063-201ENST00000621930 81 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms