Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 HSPE1P4-201ENST00000550617 308 ntBASIC3.78□□□□□ -1.8
CCDC85CA6NKD9 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC85CA6NKD9 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC85CA6NKD9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC85CA6NKD9 7SK.7-201ENST00000603504 247 ntBASIC3.78□□□□□ -1.8
CCDC85CA6NKD9 AL162730.1-201ENST00000605734 292 ntBASIC3.78□□□□□ -1.8
CCDC85CA6NKD9 AC100812.1-201ENST00000607622 580 ntBASIC3.78□□□□□ -1.8
CCDC85CA6NKD9 AC087588.2-201ENST00000617667 426 ntBASIC3.78□□□□□ -1.8
CCDC85CA6NKD9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC85CA6NKD9 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC85CA6NKD9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
CCDC85CA6NKD9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.78□□□□□ -1.81
CCDC85CA6NKD9 MAPK10-362ENST00000641864 4484 ntBASIC3.78□□□□□ -1.81
CCDC85CA6NKD9 TNPO1P3-201ENST00000436471 2662 ntBASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 AC062016.1-201ENST00000355719 319 ntBASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 SNORA29-201ENST00000384183 140 ntBASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 AC244670.1-201ENST00000436879 112 ntBASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 snoU13.30-201ENST00000458951 104 ntBASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 RNU7-175P-201ENST00000515915 61 ntBASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 RPL23AP78-201ENST00000599928 470 ntBASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 RMST_6.1-201ENST00000611980 203 ntBASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 RNVU1-4-201ENST00000612985 164 ntBASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 AC091903.1-201ENST00000624322 454 ntBASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 AC000403.1-201ENST00000613696 3585 ntBASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 MTND4P1-201ENST00000457501 1466 ntBASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC85CA6NKD9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 Y_RNA.226-201ENST00000364337 114 ntBASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 Y_RNA.645-201ENST00000391229 102 ntBASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 RNA5SP354-201ENST00000391247 136 ntBASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 MIR190B-201ENST00000401119 79 ntBASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 RN7SKP111-201ENST00000410349 271 ntBASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 RNA5SP104-201ENST00000410989 118 ntBASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 AC009414.1-201ENST00000427200 443 ntBASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 AL160004.2-201ENST00000432935 350 ntBASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 CHEK2P4-201ENST00000450340 246 ntBASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 AC015911.1-201ENST00000495111 156 ntBASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 ANXA2P1-201ENST00000505539 926 ntBASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 RNA5SP154-201ENST00000516193 111 ntBASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 NDUFB9P3-201ENST00000521269 501 ntBASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 AC021231.3-201ENST00000558497 370 ntBASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 DEFB122-202ENST00000569013 197 ntBASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 AC010928.2-201ENST00000588017 287 ntBASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 AC136443.5-201ENST00000603741 370 ntBASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 AC137590.2-201ENST00000619709 240 ntBASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 AC243829.7-201ENST00000633081 225 ntBASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC85CA6NKD9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 MTND5P27-201ENST00000428871 1720 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 Y_RNA.4-201ENST00000362333 112 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 RNU6-874P-201ENST00000362390 105 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 Y_RNA.405-201ENST00000383979 100 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 Y_RNA.451-201ENST00000384200 100 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 RNU6-17P-201ENST00000384245 107 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 RNU6-18P-201ENST00000384527 107 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 Y_RNA.524-201ENST00000384564 100 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 Y_RNA.561-201ENST00000384694 100 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 SAR1AP2-201ENST00000392696 594 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 AL512633.1-201ENST00000399931 655 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 AL358075.3-201ENST00000426289 226 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 AL353705.4-201ENST00000449661 238 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 MTND5P22-201ENST00000458380 195 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 HMGN1P10-201ENST00000474557 553 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 AC006517.1-201ENST00000480485 328 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 AC093852.1-201ENST00000503587 266 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 Y_RNA.720-201ENST00000517166 92 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 AC079598.5-201ENST00000547460 117 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 AC105137.2-201ENST00000569073 466 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms