Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 AC137800.2-201ENST00000574375 120 ntBASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 MIR8076-201ENST00000611401 83 ntBASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.74□□□□□ -2.53
LINC01549A6NIU2 RAP1BP3-201ENST00000407180 549 ntBASIC-0.75□□□□□ -2.53
LINC01549A6NIU2 SNORA40.8-201ENST00000411034 126 ntBASIC-0.75□□□□□ -2.53
LINC01549A6NIU2 AC016909.1-201ENST00000415916 166 ntBASIC-0.75□□□□□ -2.53
LINC01549A6NIU2 MTCO3P29-201ENST00000432119 779 ntBASIC-0.75□□□□□ -2.53
LINC01549A6NIU2 CECR9-201ENST00000453421 199 ntBASIC-0.75□□□□□ -2.53
LINC01549A6NIU2 AC022364.2-201ENST00000457963 554 ntBASIC-0.75□□□□□ -2.53
LINC01549A6NIU2 AC116655.1-201ENST00000508324 901 ntBASIC-0.75□□□□□ -2.53
LINC01549A6NIU2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-0.75□□□□□ -2.53
LINC01549A6NIU2 AC092325.1-201ENST00000566449 554 ntBASIC-0.75□□□□□ -2.53
LINC01549A6NIU2 MIR4645-201ENST00000583158 77 ntBASIC-0.75□□□□□ -2.53
LINC01549A6NIU2 AP001981.2-201ENST00000603241 418 ntBASIC-0.75□□□□□ -2.53
LINC01549A6NIU2 AC092447.9-201ENST00000603395 144 ntBASIC-0.75□□□□□ -2.53
LINC01549A6NIU2 MIR3976-201ENST00000606807 139 ntBASIC-0.75□□□□□ -2.53
LINC01549A6NIU2 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC-0.75□□□□□ -2.53
LINC01549A6NIU2 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.76□□□□□ -2.53
LINC01549A6NIU2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.76□□□□□ -2.53
LINC01549A6NIU2 MTND2P5-201ENST00000432656 1006 ntBASIC-0.76□□□□□ -2.53
LINC01549A6NIU2 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.76□□□□□ -2.53
LINC01549A6NIU2 MTND1P33-201ENST00000446251 917 ntBASIC-0.76□□□□□ -2.53
LINC01549A6NIU2 AC002381.1-201ENST00000447049 280 ntBASIC-0.76□□□□□ -2.53
LINC01549A6NIU2 MTCO3P10-201ENST00000455912 772 ntBASIC-0.76□□□□□ -2.53
LINC01549A6NIU2 HMGN1P10-201ENST00000474557 553 ntBASIC-0.76□□□□□ -2.53
LINC01549A6NIU2 AC024589.1-201ENST00000512207 263 ntBASIC-0.76□□□□□ -2.53
LINC01549A6NIU2 IGLVI-20-201ENST00000519296 130 ntBASIC-0.76□□□□□ -2.53
LINC01549A6NIU2 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-0.76□□□□□ -2.53
LINC01549A6NIU2 MIR4743-201ENST00000584576 69 ntBASIC-0.76□□□□□ -2.53
LINC01549A6NIU2 AP001429.1-201ENST00000602568 530 ntBASIC-0.76□□□□□ -2.53
LINC01549A6NIU2 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC-0.76□□□□□ -2.53
LINC01549A6NIU2 AC092608.3-201ENST00000625017 386 ntBASIC-0.76□□□□□ -2.53
LINC01549A6NIU2 RNU6-1010P-201ENST00000362757 107 ntBASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 SNORD14C-201ENST00000365382 88 ntBASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 RNU6-716P-201ENST00000365621 103 ntBASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 AC019070.1-201ENST00000415008 1024 ntBASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 NDUFA5P4-201ENST00000436704 385 ntBASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 AC104332.1-201ENST00000440471 797 ntBASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 RPL18AP17-201ENST00000455326 198 ntBASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 MTCO3P2-201ENST00000457365 171 ntBASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 BLNK-209ENST00000495266 440 ntTSL 5 BASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 AC114811.1-201ENST00000507207 168 ntBASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 RNU6-922P-201ENST00000516753 99 ntBASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 ZKSCAN7P1-201ENST00000543668 673 ntBASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 AC005176.2-201ENST00000596933 147 ntBASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 DUXAP11-201ENST00000603858 526 ntBASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 AL358072.1-201ENST00000604156 575 ntBASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 AC024060.1-201ENST00000607052 494 ntBASIC-0.77□□□□□ -2.53
LINC01549A6NIU2 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.78□□□□□ -2.53
LINC01549A6NIU2 MIR29B2-201ENST00000385055 81 ntBASIC-0.78□□□□□ -2.53
LINC01549A6NIU2 AL034345.1-201ENST00000407768 123 ntBASIC-0.78□□□□□ -2.53
LINC01549A6NIU2 AL451054.2-201ENST00000420896 202 ntBASIC-0.78□□□□□ -2.53
LINC01549A6NIU2 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.78□□□□□ -2.53
LINC01549A6NIU2 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.78□□□□□ -2.53
LINC01549A6NIU2 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.78□□□□□ -2.53
LINC01549A6NIU2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.78□□□□□ -2.53
LINC01549A6NIU2 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC-0.78□□□□□ -2.53
LINC01549A6NIU2 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.78□□□□□ -2.53
LINC01549A6NIU2 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-0.78□□□□□ -2.53
LINC01549A6NIU2 NIFKP8-201ENST00000560500 874 ntBASIC-0.78□□□□□ -2.53
LINC01549A6NIU2 MIR5695-201ENST00000579717 85 ntBASIC-0.78□□□□□ -2.53
LINC01549A6NIU2 SNORD39.3-201ENST00000584451 71 ntBASIC-0.78□□□□□ -2.53
LINC01549A6NIU2 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.78□□□□□ -2.53
LINC01549A6NIU2 AL603758.1-201ENST00000618654 241 ntBASIC-0.78□□□□□ -2.53
LINC01549A6NIU2 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.78□□□□□ -2.53
LINC01549A6NIU2 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.79□□□□□ -2.54
LINC01549A6NIU2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.79□□□□□ -2.54
LINC01549A6NIU2 DNAJA1P2-201ENST00000421360 1197 ntBASIC-0.79□□□□□ -2.54
LINC01549A6NIU2 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.79□□□□□ -2.54
LINC01549A6NIU2 MTCYBP10-201ENST00000424905 650 ntBASIC-0.79□□□□□ -2.54
LINC01549A6NIU2 USP9YP14-201ENST00000430663 563 ntBASIC-0.79□□□□□ -2.54
LINC01549A6NIU2 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.79□□□□□ -2.54
LINC01549A6NIU2 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC-0.79□□□□□ -2.54
LINC01549A6NIU2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.79□□□□□ -2.54
LINC01549A6NIU2 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC-0.79□□□□□ -2.54
LINC01549A6NIU2 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-0.79□□□□□ -2.54
LINC01549A6NIU2 AC122134.1-202ENST00000569111 1201 ntBASIC-0.79□□□□□ -2.54
LINC01549A6NIU2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.79□□□□□ -2.54
LINC01549A6NIU2 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.79□□□□□ -2.54
LINC01549A6NIU2 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.79□□□□□ -2.54
LINC01549A6NIU2 SNORA18.1-201ENST00000363418 128 ntBASIC-0.8□□□□□ -2.54
LINC01549A6NIU2 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.8□□□□□ -2.54
LINC01549A6NIU2 SNORD105-201ENST00000386910 85 ntBASIC-0.8□□□□□ -2.54
LINC01549A6NIU2 AL357139.1-201ENST00000407792 426 ntBASIC-0.8□□□□□ -2.54
LINC01549A6NIU2 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.8□□□□□ -2.54
LINC01549A6NIU2 AC079776.3-201ENST00000450665 370 ntBASIC-0.8□□□□□ -2.54
LINC01549A6NIU2 ELOCP24-201ENST00000456370 334 ntBASIC-0.8□□□□□ -2.54
LINC01549A6NIU2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.8□□□□□ -2.54
LINC01549A6NIU2 HESX1-202ENST00000473921 757 ntTSL 5 BASIC-0.8□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms