Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
CCDC78A2IDD5 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC78A2IDD5 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC78A2IDD5 AL356274.2-201ENST00000624379 3752 ntBASIC3.28□□□□□ -1.88
CCDC78A2IDD5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.28□□□□□ -1.89
CCDC78A2IDD5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC78A2IDD5 AC092435.3-201ENST00000565538 3654 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 RNA5SP383-201ENST00000362934 120 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 SNORD56.3-201ENST00000363507 71 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 U3.6-201ENST00000363622 211 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 Y_RNA.188-201ENST00000363952 111 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 RNU1-33P-201ENST00000364249 162 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 RNA5SP229-201ENST00000410809 99 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 RNA5SP120-201ENST00000410900 112 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 RNU6-1245P-201ENST00000411130 106 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 AC005300.1-201ENST00000428401 373 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC78A2IDD5 AL591043.1-201ENST00000432461 424 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 CYCSP32-201ENST00000440548 321 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 CHEK2P4-201ENST00000450340 246 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 snoU109.2-201ENST00000459316 135 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 RNU7-23P-201ENST00000459465 62 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC78A2IDD5 RNU7-175P-201ENST00000515915 61 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 Y_RNA.668-201ENST00000516233 93 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 RNU1-143P-201ENST00000516296 146 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 AC068657.1-201ENST00000520807 306 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC78A2IDD5 MIR3668-201ENST00000582138 75 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 HMGN2P15-201ENST00000585707 270 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC78A2IDD5 U1.23-201ENST00000610293 146 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 RNU1-68P-201ENST00000615382 146 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 U1.39-201ENST00000621562 146 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC78A2IDD5 AL049781.1-201ENST00000623195 3585 ntBASIC3.27□□□□□ -1.89
CCDC78A2IDD5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC78A2IDD5 Z83843.1-201ENST00000604070 3685 ntBASIC3.26□□□□□ -1.89
CCDC78A2IDD5 RNU6-942P-201ENST00000363002 107 ntBASIC3.26□□□□□ -1.89
CCDC78A2IDD5 RNU6-450P-201ENST00000364654 107 ntBASIC3.26□□□□□ -1.89
CCDC78A2IDD5 RNU6-713P-201ENST00000384761 107 ntBASIC3.26□□□□□ -1.89
CCDC78A2IDD5 MIR628-201ENST00000385229 95 ntBASIC3.26□□□□□ -1.89
CCDC78A2IDD5 Y_RNA.592-201ENST00000410274 109 ntBASIC3.26□□□□□ -1.89
CCDC78A2IDD5 AC092423.1-201ENST00000430165 186 ntBASIC3.26□□□□□ -1.89
CCDC78A2IDD5 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC78A2IDD5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC78A2IDD5 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC78A2IDD5 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC78A2IDD5 RN7SL601P-201ENST00000471221 293 ntBASIC3.26□□□□□ -1.89
CCDC78A2IDD5 RPS29P20-201ENST00000489592 171 ntBASIC3.26□□□□□ -1.89
CCDC78A2IDD5 RPL23AP49-201ENST00000492925 468 ntBASIC3.26□□□□□ -1.89
CCDC78A2IDD5 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC78A2IDD5 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC78A2IDD5 H3F3AP1-201ENST00000559984 334 ntBASIC3.26□□□□□ -1.89
CCDC78A2IDD5 AC011471.1-201ENST00000585766 187 ntBASIC3.26□□□□□ -1.89
CCDC78A2IDD5 AL390123.1-201ENST00000603216 237 ntBASIC3.26□□□□□ -1.89
CCDC78A2IDD5 AC004832.5-201ENST00000608677 401 ntBASIC3.26□□□□□ -1.89
CCDC78A2IDD5 AC107871.2-201ENST00000612894 502 ntBASIC3.26□□□□□ -1.89
CCDC78A2IDD5 AC024581.2-201ENST00000619986 252 ntBASIC3.26□□□□□ -1.89
CCDC78A2IDD5 MIR8062-201ENST00000621515 85 ntBASIC3.26□□□□□ -1.89
CCDC78A2IDD5 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC78A2IDD5 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC78A2IDD5 GABRG2-229ENST00000641017 3628 ntBASIC3.26□□□□□ -1.89
CCDC78A2IDD5 RNU6-874P-201ENST00000362390 105 ntBASIC3.25□□□□□ -1.89
CCDC78A2IDD5 RNU6-527P-201ENST00000363425 104 ntBASIC3.25□□□□□ -1.89
CCDC78A2IDD5 U3.13-201ENST00000364804 214 ntBASIC3.25□□□□□ -1.89
CCDC78A2IDD5 RNU4-9P-201ENST00000364951 139 ntBASIC3.25□□□□□ -1.89
CCDC78A2IDD5 Y_RNA.476-201ENST00000384347 108 ntBASIC3.25□□□□□ -1.89
CCDC78A2IDD5 SNORA48.2-201ENST00000390926 124 ntBASIC3.25□□□□□ -1.89
CCDC78A2IDD5 SNORA12.2-201ENST00000391040 156 ntBASIC3.25□□□□□ -1.89
CCDC78A2IDD5 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC78A2IDD5 RPL21P1-201ENST00000399532 476 ntBASIC3.25□□□□□ -1.89
CCDC78A2IDD5 MIR190B-201ENST00000401119 79 ntBASIC3.25□□□□□ -1.89
CCDC78A2IDD5 Z92545.1-201ENST00000411782 234 ntBASIC3.25□□□□□ -1.89
CCDC78A2IDD5 AC005326.1-201ENST00000429197 123 ntBASIC3.25□□□□□ -1.89
CCDC78A2IDD5 CBX3P6-201ENST00000430257 527 ntBASIC3.25□□□□□ -1.89
CCDC78A2IDD5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC78A2IDD5 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC78A2IDD5 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC78A2IDD5 RNY3P15-201ENST00000516297 97 ntBASIC3.25□□□□□ -1.89
CCDC78A2IDD5 Y_RNA.713-201ENST00000517013 96 ntBASIC3.25□□□□□ -1.89
CCDC78A2IDD5 AC109329.1-201ENST00000518744 317 ntBASIC3.25□□□□□ -1.89
CCDC78A2IDD5 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC78A2IDD5 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC78A2IDD5 AC005000.2-201ENST00000605468 310 ntBASIC3.25□□□□□ -1.89
CCDC78A2IDD5 AC107294.3-201ENST00000609211 526 ntBASIC3.25□□□□□ -1.89
CCDC78A2IDD5 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.25□□□□□ -1.89
CCDC78A2IDD5 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC78A2IDD5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC78A2IDD5 HAUS6P2-201ENST00000433254 2404 ntBASIC3.25□□□□□ -1.89
CCDC78A2IDD5 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
CCDC78A2IDD5 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC78A2IDD5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC78A2IDD5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC78A2IDD5 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC78A2IDD5 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
CCDC78A2IDD5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CCDC78A2IDD5 MIR148B-201ENST00000362252 99 ntBASIC3.24□□□□□ -1.89
CCDC78A2IDD5 Y_RNA.27-201ENST00000362540 103 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms