Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 RNU5A-4P-201ENST00000516588 111 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 RNA5SP490-201ENST00000517141 136 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 AC019288.1-201ENST00000557918 224 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 AC012414.6-201ENST00000568241 401 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 MIR4999-201ENST00000585029 91 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 AC098848.2-201ENST00000588023 330 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 AC005786.1-201ENST00000588553 154 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 AL031775.1-201ENST00000607014 887 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 MIR302D-201ENST00000362275 68 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 SNORD33-201ENST00000362761 85 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 RNU6-392P-201ENST00000364926 101 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 MIR513B-201ENST00000385136 84 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 Y_RNA.608-201ENST00000410647 95 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 AL008987.1-201ENST00000415528 237 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 MTND4P20-201ENST00000424125 869 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 CST2P1-201ENST00000425770 87 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 AL589872.1-201ENST00000426602 288 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 TOMM22P2-201ENST00000430735 237 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 RPS24P1-201ENST00000438550 371 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 AC004854.1-201ENST00000440356 349 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 RNU6-333P-201ENST00000459117 107 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 AC087343.1-201ENST00000477341 475 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 AF131216.2-201ENST00000512316 564 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 RNU6-685P-201ENST00000517088 95 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 AC090888.2-201ENST00000559765 1144 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 MIR5094-201ENST00000578766 85 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 MIR4295-201ENST00000585286 85 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 AP000811.1-201ENST00000603803 651 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 AC018889.1-201ENST00000605372 397 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 AP000654.2-201ENST00000605633 586 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 AC019226.2-201ENST00000625973 424 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 MTND5P9-201ENST00000503854 1755 ntBASIC0.88□□□□□ -2.27
TRAV41A0A0B4J266 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 RNY1P10-201ENST00000363268 113 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 SNORD113-6-201ENST00000363345 75 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 SNORD1A-201ENST00000364968 72 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 RNU5E-7P-201ENST00000365290 117 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 RNU6-641P-201ENST00000384006 107 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 SNORA70.7-201ENST00000384159 133 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 MIR620-201ENST00000385232 95 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 AL357139.1-201ENST00000407792 426 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 RNU2-39P-201ENST00000410604 198 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 RPL37P10-201ENST00000412884 288 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 SNRPEP10-201ENST00000420249 274 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 RPS27P16-201ENST00000425758 201 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 MED13P1-201ENST00000428342 171 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 MTND5P25-201ENST00000430499 799 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 AC119618.1-201ENST00000434191 222 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 MTCO2P29-201ENST00000465212 189 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 AC145146.1-201ENST00000496370 254 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 HMGN1P13-201ENST00000505795 138 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 ATP5EP1-201ENST00000510257 156 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 HMGN1P30-201ENST00000589286 268 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 AL034555.1-201ENST00000604816 211 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 AL121992.2-201ENST00000606262 256 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 RNU6-87P-201ENST00000607561 108 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 AL355802.3-201ENST00000607571 545 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 AC095038.3-201ENST00000634439 195 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 U4.7-201ENST00000638126 106 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 AC099654.13-201ENST00000639774 207 ntBASIC0.87□□□□□ -2.27
TRAV41A0A0B4J266 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 MIR337-201ENST00000362281 93 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 RNU6-1222P-201ENST00000384615 107 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 MIR548B-201ENST00000385247 97 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 SNORA12.2-201ENST00000391040 156 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 MIR1285-1-201ENST00000408593 84 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 RNU6-607P-201ENST00000411283 108 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 RNA5SP111-201ENST00000411386 101 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 OR6C66P-201ENST00000414917 930 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 C1DP2-201ENST00000418167 426 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 AL590556.1-201ENST00000423231 483 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 UBE2V1P8-201ENST00000437166 265 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 AL135790.2-201ENST00000437701 267 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 AC027119.1-201ENST00000440877 241 ntBASIC0.86□□□□□ -2.27
TRAV41A0A0B4J266 JTBP1-201ENST00000441314 247 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms