Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 RNU6-87P-201ENST00000607561 108 ntBASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 AC040896.1-201ENST00000613819 479 ntBASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 Y_RNA.311-201ENST00000365068 96 ntBASIC0.49□□□□□ -2.33
TRAV27A0A087WT01 MIR608-201ENST00000384820 100 ntBASIC0.49□□□□□ -2.33
TRAV27A0A087WT01 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.49□□□□□ -2.33
TRAV27A0A087WT01 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.49□□□□□ -2.33
TRAV27A0A087WT01 ELOCP17-201ENST00000414751 326 ntBASIC0.49□□□□□ -2.33
TRAV27A0A087WT01 ELOCP9-201ENST00000418624 239 ntBASIC0.49□□□□□ -2.33
TRAV27A0A087WT01 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.49□□□□□ -2.33
TRAV27A0A087WT01 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.49□□□□□ -2.33
TRAV27A0A087WT01 SNORD124-201ENST00000459577 104 ntBASIC0.49□□□□□ -2.33
TRAV27A0A087WT01 TRBVA-201ENST00000498804 316 ntBASIC0.49□□□□□ -2.33
TRAV27A0A087WT01 AC113347.3-201ENST00000509113 148 ntBASIC0.49□□□□□ -2.33
TRAV27A0A087WT01 ATP5EP1-201ENST00000510257 156 ntBASIC0.49□□□□□ -2.33
TRAV27A0A087WT01 Y_RNA.689-201ENST00000516589 107 ntBASIC0.49□□□□□ -2.33
TRAV27A0A087WT01 MTND3P13-201ENST00000574391 343 ntBASIC0.49□□□□□ -2.33
TRAV27A0A087WT01 SNORA59B-202ENST00000578183 701 ntBASIC0.49□□□□□ -2.33
TRAV27A0A087WT01 MTATP6P3-201ENST00000581686 676 ntBASIC0.49□□□□□ -2.33
TRAV27A0A087WT01 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.49□□□□□ -2.33
TRAV27A0A087WT01 AL138889.2-201ENST00000603883 242 ntBASIC0.49□□□□□ -2.33
TRAV27A0A087WT01 AC131235.4-201ENST00000609288 620 ntBASIC0.49□□□□□ -2.33
TRAV27A0A087WT01 AC068880.4-201ENST00000623082 495 ntBASIC0.49□□□□□ -2.33
TRAV27A0A087WT01 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 RNU4-15P-201ENST00000362613 141 ntBASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 RNU6-1019P-201ENST00000364424 107 ntBASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 RNU6-621P-201ENST00000364752 109 ntBASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 SNORD114-22-201ENST00000365423 72 ntBASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 RNA5SP259-201ENST00000365541 109 ntBASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 RNU6-946P-201ENST00000383878 107 ntBASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 AC114482.1-201ENST00000418010 247 ntBASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 USP9YP11-201ENST00000427537 717 ntBASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 NDUFB1P2-201ENST00000449477 176 ntBASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 ATP5J2P3-201ENST00000451550 258 ntBASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 AC021146.8-201ENST00000507455 733 ntBASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 PDCD5P2-201ENST00000507570 312 ntBASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 MTCO3P27-201ENST00000514397 196 ntBASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 SNORA70.22-201ENST00000517160 124 ntBASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 RNU6-165P-201ENST00000517170 99 ntBASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 MIR4714-201ENST00000580728 77 ntBASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 BNIP3P8-201ENST00000597863 560 ntBASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 AL159152.1-201ENST00000635019 2587 ntBASIC0.48□□□□□ -2.33
TRAV27A0A087WT01 AL589826.1-201ENST00000340697 249 ntBASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 RNY3P13-201ENST00000365542 102 ntBASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 RNU6-1176P-201ENST00000390955 107 ntBASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 SNORA12.2-201ENST00000391040 156 ntBASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 MIR1276-201ENST00000408707 83 ntBASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 RNU6-733P-201ENST00000410759 104 ntBASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 RPS25P9-201ENST00000435591 252 ntBASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 GTF2IP13-201ENST00000438487 386 ntBASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 AC006026.2-201ENST00000457376 180 ntBASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 RPS29P1-201ENST00000465274 159 ntBASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 RPS26P45-201ENST00000471748 340 ntBASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 MIR3146-201ENST00000580367 79 ntBASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 MIR4781-201ENST00000585250 76 ntBASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 BNIP3P26-201ENST00000600827 554 ntBASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 AC105129.3-201ENST00000605455 485 ntBASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 AC104073.3-201ENST00000610942 955 ntBASIC0.47□□□□□ -2.33
TRAV27A0A087WT01 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 RNA5SP432-201ENST00000362480 116 ntBASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 RNU1-96P-201ENST00000364163 162 ntBASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 RNU6-384P-201ENST00000364900 104 ntBASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 SNORA4.2-201ENST00000365313 147 ntBASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 RNU6-438P-201ENST00000365561 103 ntBASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 MIR605-201ENST00000385078 83 ntBASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 AL008629.1-201ENST00000438615 184 ntBASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 AC007969.2-201ENST00000441891 191 ntBASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 SNRPFP3-201ENST00000457792 225 ntBASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 RAP1BP2-201ENST00000478270 544 ntBASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 MTCO3P9-201ENST00000506989 781 ntBASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 AC087894.1-201ENST00000538359 518 ntBASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 AL442163.3-201ENST00000554110 156 ntBASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 AC008751.2-201ENST00000597885 980 ntBASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 DEFB131E-202ENST00000602581 683 ntBASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 AC068620.3-201ENST00000602749 560 ntBASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 AL353778.1-201ENST00000603149 408 ntBASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 AC018889.1-201ENST00000605372 397 ntBASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 AL354696.1-201ENST00000614652 497 ntBASIC0.46□□□□□ -2.34
TRAV27A0A087WT01 MTND4P16-201ENST00000466108 1367 ntBASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 RNU5E-6P-201ENST00000365574 115 ntBASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 MIR544A-201ENST00000384855 91 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms