Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC098657.3-201ENST00000620434 263 ntBASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
SNX9Q9Y5X1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 RNA5SP68-201ENST00000363885 119 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 RNU6-898P-201ENST00000365627 104 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 Y_RNA.419-201ENST00000384041 102 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 RNU6-214P-201ENST00000384130 107 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 RNA5SP210-201ENST00000391034 120 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 AC023141.4-201ENST00000412031 328 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 RPL37P10-201ENST00000412884 288 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 AL117339.3-201ENST00000418733 162 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 RPS15AP7-201ENST00000439294 405 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 HMGN2P10-201ENST00000448085 265 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 AC107399.1-201ENST00000451226 265 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 SNORD19B-201ENST00000459623 84 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 AC096745.1-201ENST00000509945 370 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 SNORA31.15-201ENST00000516771 132 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 AC022634.1-201ENST00000520765 532 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 APOOP3-201ENST00000536787 586 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 AC025281.1-201ENST00000567026 265 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 HMGN2P15-201ENST00000585707 270 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 AL356055.1-201ENST00000602528 446 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 MIR6817-201ENST00000615588 66 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 FO624990.1-201ENST00000636373 85 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 CDC27P3-201ENST00000635418 1910 ntBASIC2.76□□□□□ -1.97
SNX9Q9Y5X1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 SNORA68.1-201ENST00000364537 132 ntBASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 Y_RNA.394-201ENST00000383942 103 ntBASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 Y_RNA.482-201ENST00000384377 111 ntBASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 U3.37-201ENST00000408528 213 ntBASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 RPS20P15-201ENST00000412792 311 ntBASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 HIGD1AP2-201ENST00000446367 280 ntBASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 RPS3P1-201ENST00000456781 192 ntBASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 RNU7-187P-201ENST00000458985 68 ntBASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 Y_RNA.635-201ENST00000459041 101 ntBASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 MRPS36P2-201ENST00000512569 299 ntBASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 RNA5SP148-201ENST00000516527 94 ntBASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 AC104576.1-201ENST00000524225 88 ntBASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 CPDP1-201ENST00000579660 283 ntBASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 MIR4719-201ENST00000585233 84 ntBASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 MTND4LP32-201ENST00000636111 270 ntBASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 U4.7-201ENST00000638126 106 ntBASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 AC135776.4-201ENST00000624300 1904 ntBASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 AC110491.1-201ENST00000562191 2010 ntBASIC2.75□□□□□ -1.97
SNX9Q9Y5X1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 Y_RNA.384-201ENST00000383909 102 ntBASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 AL445529.1-201ENST00000398713 389 ntBASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 AL139396.1-201ENST00000421137 167 ntBASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 MTND1P14-201ENST00000427400 950 ntBASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 RPL26P9-201ENST00000457466 433 ntBASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 MTCYBP40-201ENST00000509390 1135 ntBASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 AC026782.1-201ENST00000512952 449 ntBASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 RNU6-559P-201ENST00000516151 98 ntBASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 Y_RNA.718-201ENST00000517110 102 ntBASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 TRAV32-201ENST00000553993 340 ntBASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 AC021739.1-201ENST00000559631 174 ntBASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 AC044792.1-201ENST00000593294 196 ntBASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 AC008121.1-201ENST00000603244 268 ntBASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 AL049779.4-201ENST00000604500 156 ntBASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 AL121917.1-203ENST00000605534 577 ntBASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 AL133255.1-201ENST00000606374 441 ntBASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 AC244517.12-201ENST00000623581 663 ntBASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 AC010297.1-201ENST00000623948 149 ntBASIC2.74□□□□□ -1.97
SNX9Q9Y5X1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.73□□□□□ -1.97
SNX9Q9Y5X1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SNX9Q9Y5X1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.73□□□□□ -1.97
SNX9Q9Y5X1 RNU6-461P-201ENST00000364195 107 ntBASIC2.73□□□□□ -1.97
SNX9Q9Y5X1 RNU1-138P-201ENST00000384093 164 ntBASIC2.73□□□□□ -1.97
SNX9Q9Y5X1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.73□□□□□ -1.97
SNX9Q9Y5X1 RNA5SP320-201ENST00000516263 124 ntBASIC2.73□□□□□ -1.97
SNX9Q9Y5X1 COX6CP5-201ENST00000527162 228 ntBASIC2.73□□□□□ -1.97
SNX9Q9Y5X1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms