Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 MIR4680-201ENST00000580906 66 ntBASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 MIR4737-201ENST00000583979 81 ntBASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 AL356280.1-201ENST00000603614 379 ntBASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 AL355480.1-201ENST00000629041 99 ntBASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.83□□□□□ -1.64
GTF3C3Q9Y5Q9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 SDAD1P1-202ENST00000524156 2051 ntBASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 Y_RNA.27-201ENST00000362540 103 ntBASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 RNA5SP383-201ENST00000362934 120 ntBASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 RNU6-461P-201ENST00000364195 107 ntBASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 RNU4-50P-201ENST00000364361 141 ntBASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 SNORA63.7-201ENST00000365579 123 ntBASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 Y_RNA.380-201ENST00000365663 111 ntBASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 FO393413.1-201ENST00000402892 195 ntBASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 RPL23AP27-201ENST00000415161 451 ntBASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 AL161788.1-201ENST00000441805 169 ntBASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 AC096638.1-201ENST00000444678 216 ntBASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 CHEK2P4-201ENST00000450340 246 ntBASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 RN7SL177P-201ENST00000476596 299 ntBASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 RN7SL604P-201ENST00000492589 296 ntBASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 HMGN2P6-201ENST00000551091 273 ntBASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 AL713866.2-201ENST00000603579 219 ntBASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 SDR42E1P1-201ENST00000611327 477 ntBASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 AL049539.1-201ENST00000611964 459 ntBASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 ZNF204P-201ENST00000416749 2397 ntBASIC4.82□□□□□ -1.64
GTF3C3Q9Y5Q9 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.81□□□□□ -1.64
GTF3C3Q9Y5Q9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GTF3C3Q9Y5Q9 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GTF3C3Q9Y5Q9 Y_RNA.152-201ENST00000363578 100 ntBASIC4.81□□□□□ -1.64
GTF3C3Q9Y5Q9 RNU6-879P-201ENST00000364328 108 ntBASIC4.81□□□□□ -1.64
GTF3C3Q9Y5Q9 SNORA63C-201ENST00000364578 129 ntBASIC4.81□□□□□ -1.64
GTF3C3Q9Y5Q9 Y_RNA.455-201ENST00000384230 98 ntBASIC4.81□□□□□ -1.64
GTF3C3Q9Y5Q9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GTF3C3Q9Y5Q9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.81□□□□□ -1.64
GTF3C3Q9Y5Q9 RPS3AP12-201ENST00000443616 753 ntBASIC4.81□□□□□ -1.64
GTF3C3Q9Y5Q9 CEACAMP7-201ENST00000444105 496 ntBASIC4.81□□□□□ -1.64
GTF3C3Q9Y5Q9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.81□□□□□ -1.64
GTF3C3Q9Y5Q9 RNU6-764P-201ENST00000516396 105 ntBASIC4.81□□□□□ -1.64
GTF3C3Q9Y5Q9 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.81□□□□□ -1.64
GTF3C3Q9Y5Q9 CYCSP23-201ENST00000519781 313 ntBASIC4.81□□□□□ -1.64
GTF3C3Q9Y5Q9 AC040926.1-201ENST00000530195 238 ntBASIC4.81□□□□□ -1.64
GTF3C3Q9Y5Q9 AC005034.5-201ENST00000604219 466 ntBASIC4.81□□□□□ -1.64
GTF3C3Q9Y5Q9 AC124312.5-201ENST00000604451 268 ntBASIC4.81□□□□□ -1.64
GTF3C3Q9Y5Q9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GTF3C3Q9Y5Q9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.8□□□□□ -1.64
GTF3C3Q9Y5Q9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GTF3C3Q9Y5Q9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.8□□□□□ -1.64
GTF3C3Q9Y5Q9 RNU6-222P-201ENST00000362438 107 ntBASIC4.8□□□□□ -1.64
GTF3C3Q9Y5Q9 MIR10B-201ENST00000385011 110 ntBASIC4.8□□□□□ -1.64
GTF3C3Q9Y5Q9 Y_RNA.597-201ENST00000410463 100 ntBASIC4.8□□□□□ -1.64
GTF3C3Q9Y5Q9 AC112220.1-201ENST00000434628 355 ntBASIC4.8□□□□□ -1.64
GTF3C3Q9Y5Q9 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.8□□□□□ -1.64
GTF3C3Q9Y5Q9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.8□□□□□ -1.64
GTF3C3Q9Y5Q9 SNORA25.14-201ENST00000516481 132 ntBASIC4.8□□□□□ -1.64
GTF3C3Q9Y5Q9 AC245166.1-201ENST00000521012 253 ntBASIC4.8□□□□□ -1.64
GTF3C3Q9Y5Q9 AP002770.2-201ENST00000543613 532 ntBASIC4.8□□□□□ -1.64
GTF3C3Q9Y5Q9 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.8□□□□□ -1.64
GTF3C3Q9Y5Q9 AC090517.1-201ENST00000569307 266 ntBASIC4.8□□□□□ -1.64
GTF3C3Q9Y5Q9 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.8□□□□□ -1.64
GTF3C3Q9Y5Q9 MIR5695-201ENST00000579717 85 ntBASIC4.8□□□□□ -1.64
GTF3C3Q9Y5Q9 AC008737.2-201ENST00000599446 118 ntBASIC4.8□□□□□ -1.64
GTF3C3Q9Y5Q9 AC104695.3-201ENST00000604052 296 ntBASIC4.8□□□□□ -1.64
GTF3C3Q9Y5Q9 AC018692.3-201ENST00000623929 123 ntBASIC4.8□□□□□ -1.64
GTF3C3Q9Y5Q9 FAM35CP-201ENST00000554755 2470 ntBASIC4.8□□□□□ -1.64
GTF3C3Q9Y5Q9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GTF3C3Q9Y5Q9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC4.79□□□□□ -1.64
GTF3C3Q9Y5Q9 RNU6-281P-201ENST00000384212 103 ntBASIC4.79□□□□□ -1.64
GTF3C3Q9Y5Q9 RNY3P4-201ENST00000384428 101 ntBASIC4.79□□□□□ -1.64
GTF3C3Q9Y5Q9 snosnR66.1-201ENST00000391095 99 ntBASIC4.79□□□□□ -1.64
GTF3C3Q9Y5Q9 Y_RNA.645-201ENST00000391229 102 ntBASIC4.79□□□□□ -1.64
GTF3C3Q9Y5Q9 SPTLC1P2-201ENST00000407089 121 ntBASIC4.79□□□□□ -1.64
GTF3C3Q9Y5Q9 MIR1294-201ENST00000408503 142 ntBASIC4.79□□□□□ -1.64
GTF3C3Q9Y5Q9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.79□□□□□ -1.64
GTF3C3Q9Y5Q9 MTND2P23-201ENST00000422990 651 ntBASIC4.79□□□□□ -1.64
GTF3C3Q9Y5Q9 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.79□□□□□ -1.64
GTF3C3Q9Y5Q9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.79□□□□□ -1.64
GTF3C3Q9Y5Q9 Y_RNA.720-201ENST00000517166 92 ntBASIC4.79□□□□□ -1.64
GTF3C3Q9Y5Q9 HSPE1P20-201ENST00000538133 289 ntBASIC4.79□□□□□ -1.64
GTF3C3Q9Y5Q9 TCL6_2.1-201ENST00000615162 119 ntBASIC4.79□□□□□ -1.64
GTF3C3Q9Y5Q9 ZNF72P-201ENST00000425869 1908 ntBASIC4.79□□□□□ -1.64
GTF3C3Q9Y5Q9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GTF3C3Q9Y5Q9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GTF3C3Q9Y5Q9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GTF3C3Q9Y5Q9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
GTF3C3Q9Y5Q9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
GTF3C3Q9Y5Q9 RNA5SP424-201ENST00000390988 115 ntBASIC4.78□□□□□ -1.64
GTF3C3Q9Y5Q9 RPL21P3-201ENST00000395517 478 ntBASIC4.78□□□□□ -1.64
GTF3C3Q9Y5Q9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.78□□□□□ -1.64
GTF3C3Q9Y5Q9 AL445687.1-201ENST00000439946 251 ntBASIC4.78□□□□□ -1.64
GTF3C3Q9Y5Q9 AC022695.1-201ENST00000522089 237 ntBASIC4.78□□□□□ -1.64
GTF3C3Q9Y5Q9 AC136624.4-201ENST00000573044 370 ntBASIC4.78□□□□□ -1.64
GTF3C3Q9Y5Q9 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.78□□□□□ -1.64
GTF3C3Q9Y5Q9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC4.78□□□□□ -1.64
GTF3C3Q9Y5Q9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC4.78□□□□□ -1.64
GTF3C3Q9Y5Q9 AC005562.2-201ENST00000618264 111 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms