Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SNORA46-201ENST00000384762 135 ntBASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 MIR29B2-201ENST00000385055 81 ntBASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 HMGB1P35-201ENST00000503360 598 ntBASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 FGF7P4-201ENST00000509595 295 ntBASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 Y_RNA.708-201ENST00000516950 96 ntBASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 AP002404.1-201ENST00000532005 451 ntBASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 AC093249.1-201ENST00000567049 203 ntBASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 FGF7P1-201ENST00000582820 288 ntBASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 MIR4273-201ENST00000582824 84 ntBASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 AC060766.3-201ENST00000591442 263 ntBASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 AL034555.1-201ENST00000604816 211 ntBASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 AC018462.2-201ENST00000605375 395 ntBASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.42□□□□□ -1.86
COL4A3BPQ9Y5P4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.42□□□□□ -1.86
COL4A3BPQ9Y5P4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.42□□□□□ -1.86
COL4A3BPQ9Y5P4 Y_RNA.356-201ENST00000365475 113 ntBASIC3.42□□□□□ -1.86
COL4A3BPQ9Y5P4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.42□□□□□ -1.86
COL4A3BPQ9Y5P4 RNU6-968P-201ENST00000384076 107 ntBASIC3.42□□□□□ -1.86
COL4A3BPQ9Y5P4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.42□□□□□ -1.86
COL4A3BPQ9Y5P4 RPS3P1-201ENST00000456781 192 ntBASIC3.42□□□□□ -1.86
COL4A3BPQ9Y5P4 AC090525.1-201ENST00000479116 478 ntBASIC3.42□□□□□ -1.86
COL4A3BPQ9Y5P4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.42□□□□□ -1.86
COL4A3BPQ9Y5P4 AC091874.1-201ENST00000511402 339 ntBASIC3.42□□□□□ -1.86
COL4A3BPQ9Y5P4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.42□□□□□ -1.86
COL4A3BPQ9Y5P4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.42□□□□□ -1.86
COL4A3BPQ9Y5P4 AC109446.1-201ENST00000566172 220 ntBASIC3.42□□□□□ -1.86
COL4A3BPQ9Y5P4 AL132765.2-201ENST00000610812 351 ntBASIC3.42□□□□□ -1.86
COL4A3BPQ9Y5P4 PISRT1.1-201ENST00000616930 107 ntBASIC3.42□□□□□ -1.86
COL4A3BPQ9Y5P4 MIR1302-1-201ENST00000637932 143 ntBASIC3.42□□□□□ -1.86
COL4A3BPQ9Y5P4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL4A3BPQ9Y5P4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL4A3BPQ9Y5P4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.42□□□□□ -1.86
COL4A3BPQ9Y5P4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 SNORD67-201ENST00000390833 111 ntBASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 RPL21P3-201ENST00000395517 478 ntBASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 USP9YP30-201ENST00000430729 455 ntBASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 AC104389.3-201ENST00000445629 235 ntBASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 UQCRHP3-201ENST00000451503 251 ntBASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 MTND4P17-201ENST00000470444 350 ntBASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 MTCO3P13-201ENST00000577757 781 ntBASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 MIR5571-201ENST00000577998 113 ntBASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 AC016727.1-205ENST00000605437 569 ntBASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 LARP7P1-201ENST00000605576 316 ntBASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 AC135507.2-201ENST00000612443 309 ntBASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 AC009233.1-201ENST00000616477 371 ntBASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 AC090517.3-201ENST00000625170 141 ntBASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 AL355596.1-201ENST00000565399 3996 ntBASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
COL4A3BPQ9Y5P4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.4□□□□□ -1.86
COL4A3BPQ9Y5P4 RNU1-72P-201ENST00000362976 153 ntBASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 RNU6-1286P-201ENST00000383871 107 ntBASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 Y_RNA.387-201ENST00000383918 102 ntBASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 Y_RNA.474-201ENST00000384341 102 ntBASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 UBA52P6-201ENST00000399822 382 ntBASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 RNU6-1050P-201ENST00000410388 107 ntBASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 RNU2-41P-201ENST00000410991 178 ntBASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 RNA5SP492-201ENST00000411330 114 ntBASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 FTH1P25-201ENST00000447665 469 ntBASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 AL513124.1-201ENST00000450410 614 ntBASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 AC026782.1-201ENST00000512952 449 ntBASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 RNU6-307P-201ENST00000516743 106 ntBASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 AL713866.2-201ENST00000603579 219 ntBASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 SNORA43.4-201ENST00000629559 138 ntBASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 AC233981.2-201ENST00000611524 1614 ntBASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.4□□□□□ -1.87
COL4A3BPQ9Y5P4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL4A3BPQ9Y5P4 MTND5P9-201ENST00000503854 1755 ntBASIC3.39□□□□□ -1.87
COL4A3BPQ9Y5P4 SNORA71.1-201ENST00000364523 117 ntBASIC3.39□□□□□ -1.87
COL4A3BPQ9Y5P4 RNA5SP274-201ENST00000410484 108 ntBASIC3.39□□□□□ -1.87
COL4A3BPQ9Y5P4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.39□□□□□ -1.87
COL4A3BPQ9Y5P4 RN7SL75P-201ENST00000461926 281 ntBASIC3.39□□□□□ -1.87
COL4A3BPQ9Y5P4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.39□□□□□ -1.87
COL4A3BPQ9Y5P4 MTND3P22-201ENST00000510932 243 ntBASIC3.39□□□□□ -1.87
COL4A3BPQ9Y5P4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.39□□□□□ -1.87
COL4A3BPQ9Y5P4 RNU6-586P-201ENST00000517265 104 ntBASIC3.39□□□□□ -1.87
COL4A3BPQ9Y5P4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms