Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 RPL21P16-201ENST00000495531 483 ntBASIC2.84□□□□□ -1.95
PCDHAC2Q9Y5I4 MTCO1P29-201ENST00000496868 288 ntBASIC2.84□□□□□ -1.95
PCDHAC2Q9Y5I4 AC008526.1-201ENST00000509149 338 ntBASIC2.84□□□□□ -1.95
PCDHAC2Q9Y5I4 RNU6-1046P-201ENST00000516538 107 ntBASIC2.84□□□□□ -1.95
PCDHAC2Q9Y5I4 APOOP3-201ENST00000536787 586 ntBASIC2.84□□□□□ -1.95
PCDHAC2Q9Y5I4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDHAC2Q9Y5I4 HMGB1P14-201ENST00000557424 591 ntBASIC2.84□□□□□ -1.95
PCDHAC2Q9Y5I4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDHAC2Q9Y5I4 MIR1273D-201ENST00000577266 86 ntBASIC2.84□□□□□ -1.95
PCDHAC2Q9Y5I4 AC084781.2-201ENST00000615568 161 ntBASIC2.84□□□□□ -1.95
PCDHAC2Q9Y5I4 MIR1291-201ENST00000627649 87 ntBASIC2.84□□□□□ -1.95
PCDHAC2Q9Y5I4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PCDHAC2Q9Y5I4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.84□□□□□ -1.96
PCDHAC2Q9Y5I4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
PCDHAC2Q9Y5I4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 RNU1-100P-201ENST00000365255 165 ntBASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 Y_RNA.387-201ENST00000383918 102 ntBASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 RNU1-73P-201ENST00000383971 164 ntBASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 RNU6-658P-201ENST00000384606 106 ntBASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 MIR606-201ENST00000384851 96 ntBASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 RNA5SP38-201ENST00000410750 119 ntBASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 AL353621.1-201ENST00000418219 243 ntBASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 NCOR1P3-201ENST00000420479 303 ntBASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 HMGN2P30-201ENST00000423237 256 ntBASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 SAR1AP4-201ENST00000429225 591 ntBASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 AC096638.1-201ENST00000444678 216 ntBASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 AC104389.3-201ENST00000445629 235 ntBASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 RNU6-572P-201ENST00000516724 80 ntBASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 Y_RNA.718-201ENST00000517110 102 ntBASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 AP000867.2-201ENST00000532468 320 ntBASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 AC015712.3-201ENST00000559380 164 ntBASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 MTND4LP5-201ENST00000605152 292 ntBASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 AC123912.5-201ENST00000605470 343 ntBASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 AC016717.2-201ENST00000609089 5141 ntBASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
PCDHAC2Q9Y5I4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 RNU6-270P-201ENST00000364131 105 ntBASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 RNU6-738P-201ENST00000384531 106 ntBASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 AL135786.1-201ENST00000415892 214 ntBASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 AL356320.1-201ENST00000429616 163 ntBASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 AC005741.1-201ENST00000511094 432 ntBASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 RNU6-1045P-201ENST00000516321 107 ntBASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 SNORA31.19-201ENST00000517079 126 ntBASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 AL121821.2-201ENST00000556081 394 ntBASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 AMZ2P1-203ENST00000565833 850 ntBASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 MIR4790-201ENST00000577799 79 ntBASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 AC023043.3-201ENST00000593113 385 ntBASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 AC124303.1-201ENST00000605703 360 ntBASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 AC010205.1-201ENST00000616668 449 ntBASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 RMST_4.1-201ENST00000616886 107 ntBASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 AL031601.2-202ENST00000622650 282 ntBASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
PCDHAC2Q9Y5I4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 MIR369-201ENST00000362155 70 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 RNA5SP99-201ENST00000364020 114 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 Y_RNA.259-201ENST00000364619 101 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 RNU1-91P-201ENST00000364746 163 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 Y_RNA.315-201ENST00000365117 102 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 SNORD42.2-201ENST00000365570 69 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 SNORA67.3-201ENST00000384366 140 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 RNU6-95P-201ENST00000384697 107 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 MT-TR-201ENST00000387439 65 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 Y_RNA.579-201ENST00000390939 94 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 AL023284.1-201ENST00000403956 276 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 FABP5P14-201ENST00000437273 393 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 RPL23AP58-201ENST00000440453 469 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 AL583843.1-201ENST00000456070 346 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 RPL26P9-201ENST00000457466 433 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 snoU13.23-201ENST00000458863 104 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 RNU7-152P-201ENST00000458982 64 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 AC011005.2-201ENST00000487324 359 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 HMGB1P30-201ENST00000492455 606 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 RNU6-559P-201ENST00000516151 98 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 RNU6-1332P-201ENST00000516666 104 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 IMMP1LP2-201ENST00000552954 492 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 MIR3941-201ENST00000582572 103 ntBASIC2.81□□□□□ -1.96
PCDHAC2Q9Y5I4 MIR3171-201ENST00000584270 74 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms