Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC007742.2-201ENST00000618226 398 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 Y_RNA.801-201ENST00000619005 101 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 AC010329.5-201ENST00000623497 2174 ntBASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA3Q9Y5H0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 OR56A5-201ENST00000340110 738 ntBASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU6-529P-201ENST00000363383 104 ntBASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 Y_RNA.138-201ENST00000363462 102 ntBASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 Y_RNA.504-201ENST00000384481 104 ntBASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 SNORA48.2-201ENST00000390926 124 ntBASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 AC097463.2-201ENST00000421074 142 ntBASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 AL035666.1-201ENST00000446195 348 ntBASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 AL353705.4-201ENST00000449661 238 ntBASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 SNRPGP7-201ENST00000469016 106 ntBASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 AC104581.2-201ENST00000572227 430 ntBASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 MIR5571-201ENST00000577998 113 ntBASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 AC008739.2-201ENST00000597006 317 ntBASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 AC073410.2-201ENST00000603240 332 ntBASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 AC005014.2-201ENST00000607795 599 ntBASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 AL159153.1-201ENST00000619688 317 ntBASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PCDHGA3Q9Y5H0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 AC092435.3-201ENST00000565538 3654 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 Z83843.1-201ENST00000604070 3685 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU6-1159P-201ENST00000362933 107 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU6-486P-201ENST00000363116 107 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU1-115P-201ENST00000365329 160 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 DYNLT3P1-201ENST00000378574 347 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 Y_RNA.394-201ENST00000383942 103 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU6-474P-201ENST00000384243 107 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU1-57P-201ENST00000384491 166 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 MIR625-201ENST00000385047 85 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 AC018865.2-201ENST00000423631 129 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 AC009969.1-201ENST00000438726 172 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 AIG1P1-201ENST00000503376 148 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 MTND4LP22-201ENST00000508209 276 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 FCF1P8-201ENST00000510322 597 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 MRPS36P2-201ENST00000512569 299 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 AC091144.1-201ENST00000519573 138 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 AC020661.2-201ENST00000560114 134 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 MIR5701-3-201ENST00000578890 82 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 MIR3171-201ENST00000584270 74 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 MIR5701-1-201ENST00000585138 82 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 AL158827.2-201ENST00000602494 330 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 AL133393.1-201ENST00000603277 287 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 MIR5701-2-201ENST00000615634 82 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 AC022149.2-201ENST00000621061 203 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 SCARNA4-201ENST00000629045 128 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 AL691447.3-201ENST00000635020 330 ntBASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGA3Q9Y5H0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 AC093908.1-201ENST00000623125 8092 ntBASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 Y_RNA.28-201ENST00000362554 111 ntBASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU6-212P-201ENST00000362642 104 ntBASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 Y_RNA.48-201ENST00000362710 103 ntBASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 SNORA26.3-201ENST00000391119 136 ntBASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 AL133475.1-201ENST00000404414 305 ntBASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 AL353705.1-201ENST00000433468 480 ntBASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 RPL27AP5-201ENST00000469428 449 ntBASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 RPL30P1-201ENST00000488676 339 ntBASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 AC006445.1-201ENST00000491925 405 ntBASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 AC110794.1-201ENST00000505816 425 ntBASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU6-1198P-201ENST00000516904 67 ntBASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 RNU6-699P-201ENST00000517081 110 ntBASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 AC144568.1-201ENST00000520139 137 ntBASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 AC100812.1-201ENST00000607622 580 ntBASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 AL359198.2-201ENST00000611836 194 ntBASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 AL138825.1-201ENST00000618587 192 ntBASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 AC068647.1-201ENST00000489539 2265 ntBASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms