Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SF3B6Q9Y3B4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
SF3B6Q9Y3B4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.56□□□□□ -1.84
SF3B6Q9Y3B4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SF3B6Q9Y3B4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SF3B6Q9Y3B4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 MIR410-201ENST00000362222 80 ntBASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 RNU5F-3P-201ENST00000363767 117 ntBASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 Y_RNA.180-201ENST00000363867 113 ntBASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 SNORA72.2-201ENST00000365028 127 ntBASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 RNU6-793P-201ENST00000384233 104 ntBASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 RNU6-750P-201ENST00000390946 107 ntBASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 MTCO1P5-201ENST00000433573 344 ntBASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 AL162151.2-201ENST00000448875 158 ntBASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 AL441985.1-201ENST00000457727 251 ntBASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 RN7SL385P-201ENST00000468873 276 ntBASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 SNRPGP3-201ENST00000469405 227 ntBASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 RNA5SP49-201ENST00000516450 115 ntBASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 CBX3P4-201ENST00000538909 354 ntBASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 RNU6-91P-201ENST00000607774 107 ntBASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 AC006111.3-201ENST00000622137 383 ntBASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.55□□□□□ -1.84
SF3B6Q9Y3B4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 SNORD114-19-201ENST00000363072 75 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 Y_RNA.122-201ENST00000363331 96 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 Y_RNA.275-201ENST00000364726 110 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 Y_RNA.292-201ENST00000364904 97 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 RNA5SP366-201ENST00000365454 123 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 RNU6-213P-201ENST00000384051 104 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 RNU6-886P-201ENST00000384319 105 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 Y_RNA.498-201ENST00000384460 102 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 Y_RNA.626-201ENST00000411288 95 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 RPL23AP36-201ENST00000413895 458 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 RAB28P5-201ENST00000427490 651 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 RNA5SP246-201ENST00000458909 119 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 AP001324.2-201ENST00000461163 319 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 AC107393.1-201ENST00000512403 346 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 Y_RNA.679-201ENST00000516416 91 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 PARP1P2-201ENST00000556806 195 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 AL512605.2-201ENST00000592972 256 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 AC022441.3-201ENST00000605737 136 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 MIR6716-201ENST00000613413 80 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 AC005520.5-201ENST00000613926 164 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 AC114781.5-201ENST00000615297 108 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 MIR6830-201ENST00000636015 70 ntBASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SF3B6Q9Y3B4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 AC010680.1-201ENST00000590024 3590 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 RNU6-1010P-201ENST00000362757 107 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 Y_RNA.101-201ENST00000363154 102 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 RNY4P28-201ENST00000365281 93 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 RNU6-245P-201ENST00000384020 107 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 MIR548M-201ENST00000408260 86 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 MIR1251-201ENST00000408552 70 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 Y_RNA.590-201ENST00000410140 107 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 ELOCP21-201ENST00000412558 336 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 RPL23AP26-201ENST00000412728 464 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 AIMP1P2-201ENST00000425294 312 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 RPL23AP46-201ENST00000438548 490 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 IFNA11P-201ENST00000446352 526 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 AC009237.7-201ENST00000447357 229 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 NDUFB4P10-201ENST00000452541 359 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 AL031183.1-201ENST00000457667 207 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 UQCRHP4-201ENST00000471686 272 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 AC074133.1-201ENST00000515696 183 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 TVP23BP1-201ENST00000557500 617 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 AC012493.2-201ENST00000595083 291 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 AL391813.1-201ENST00000603098 260 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 AL590240.4-201ENST00000616908 390 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 MIR6758-201ENST00000620653 63 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 AC092628.2-201ENST00000622492 339 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 MIR3653-201ENST00000625572 110 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 AC099654.7-201ENST00000635788 2127 ntBASIC3.53□□□□□ -1.84
SF3B6Q9Y3B4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 153.5 ms