Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 AL672296.1-201ENST00000427780 2158 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 Y_RNA.82-201ENST00000363000 102 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 Y_RNA.92-201ENST00000363043 102 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 Y_RNA.235-201ENST00000364412 102 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 Y_RNA.306-201ENST00000365015 102 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 Y_RNA.308-201ENST00000365043 101 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 Y_RNA.312-201ENST00000365089 102 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 Y_RNA.322-201ENST00000365151 102 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 Y_RNA.324-201ENST00000365165 102 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 Y_RNA.358-201ENST00000365491 99 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 MIR92A2-201ENST00000385299 75 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 RPL21P75-201ENST00000396599 483 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 RPL21P28-201ENST00000401418 483 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 RPL21P90-201ENST00000415692 466 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 AL590556.1-201ENST00000423231 483 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 HSPE1P25-201ENST00000455484 251 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 Y_RNA.650-201ENST00000459002 102 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 RPL21P39-201ENST00000463605 483 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 AC093591.1-201ENST00000491435 481 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 RPL21P16-201ENST00000495531 483 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 Y_RNA.777-201ENST00000516982 102 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 Y_RNA.771-201ENST00000598668 102 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 AP000787.2-201ENST00000604432 568 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 Y_RNA.789-201ENST00000622480 102 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 AP000560.1-201ENST00000624150 1937 ntBASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
NOTCH3Q9UM47 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 CDC27P2-201ENST00000425026 1922 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 Z75746.1-201ENST00000440243 2080 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 RPL9P7-201ENST00000330965 580 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 RNU6-1303P-201ENST00000364841 107 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 Y_RNA.400-201ENST00000383963 111 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 RNY3P4-201ENST00000384428 101 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 RNU6-14P-201ENST00000384630 106 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 AC234781.4-201ENST00000419384 244 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 AL513043.1-201ENST00000439124 535 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 RPL9P9-202ENST00000466501 579 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 AC117440.1-201ENST00000474107 571 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 SNORA70.19-201ENST00000516717 90 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 SNORA31.21-201ENST00000517180 77 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 AC136932.1-201ENST00000574771 208 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 MIR4738-201ENST00000579134 87 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 RPS29P30-201ENST00000600975 111 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 uc_338.9-201ENST00000617424 182 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 AC097372.5-201ENST00000623665 376 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 SNORD81.1-201ENST00000363064 77 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 RNU6-44P-201ENST00000384045 107 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 RNU6-637P-201ENST00000384050 107 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 Y_RNA.439-201ENST00000384119 94 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 AC099677.1-201ENST00000420575 175 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 AL160275.3-201ENST00000423876 471 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 RPS6P12-201ENST00000432491 726 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 RPL21P41-201ENST00000459863 264 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 AC010469.2-201ENST00000496412 480 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 MIR5047-201ENST00000579212 100 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 AC104465.1-201ENST00000611365 139 ntBASIC2.33□□□□□ -2.04
NOTCH3Q9UM47 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 AC073325.2-201ENST00000339545 159 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 RNU6-1298P-201ENST00000362456 101 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 Y_RNA.43-201ENST00000362670 111 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 RNU6-371P-201ENST00000364283 108 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 AL138827.1-201ENST00000402666 306 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 RPL19P1-201ENST00000411635 428 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 AL592148.1-201ENST00000413568 445 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 AL031736.2-201ENST00000426573 787 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 AL162389.1-201ENST00000449233 177 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 AC087477.1-201ENST00000465747 340 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 AC135721.1-201ENST00000497954 479 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 RNU6-496P-201ENST00000516145 99 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 RNA5SP367-201ENST00000516557 118 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 RNU6-919P-201ENST00000516731 104 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 MIR2355-201ENST00000517199 87 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 DEFB108D-201ENST00000527787 222 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 AK6P2-201ENST00000549020 471 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms