Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 MIR514A1-201ENST00000385133 98 ntBASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 MIR1251-201ENST00000408552 70 ntBASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 RNU6-257P-201ENST00000410238 98 ntBASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 MTCO1P39-201ENST00000426148 480 ntBASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 AL627311.1-201ENST00000431514 115 ntBASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 AC139453.3-201ENST00000493276 369 ntBASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 Y_RNA.679-201ENST00000516416 91 ntBASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 ATP5F1P5-201ENST00000526403 760 ntBASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 MIR4282-201ENST00000583613 67 ntBASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 AC060766.3-201ENST00000591442 263 ntBASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 RNU1-30P-201ENST00000606575 163 ntBASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 AC005046.1-201ENST00000608515 625 ntBASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.09□□□□□ -1.75
LMCD1Q9NZU5 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
LMCD1Q9NZU5 Y_RNA.218-201ENST00000364218 104 ntBASIC4.09□□□□□ -1.75
LMCD1Q9NZU5 Y_RNA.400-201ENST00000383963 111 ntBASIC4.09□□□□□ -1.75
LMCD1Q9NZU5 SNORA48.2-201ENST00000390926 124 ntBASIC4.09□□□□□ -1.75
LMCD1Q9NZU5 Y_RNA.590-201ENST00000410140 107 ntBASIC4.09□□□□□ -1.75
LMCD1Q9NZU5 RNU2-52P-201ENST00000410680 190 ntBASIC4.09□□□□□ -1.75
LMCD1Q9NZU5 AC007560.1-201ENST00000426912 237 ntBASIC4.09□□□□□ -1.75
LMCD1Q9NZU5 AL356535.1-201ENST00000440335 398 ntBASIC4.09□□□□□ -1.75
LMCD1Q9NZU5 AC025554.1-201ENST00000505641 188 ntBASIC4.09□□□□□ -1.75
LMCD1Q9NZU5 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.09□□□□□ -1.75
LMCD1Q9NZU5 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.09□□□□□ -1.75
LMCD1Q9NZU5 RNU5F-8P-201ENST00000515941 111 ntBASIC4.09□□□□□ -1.75
LMCD1Q9NZU5 RNU6-426P-201ENST00000516464 97 ntBASIC4.09□□□□□ -1.75
LMCD1Q9NZU5 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LMCD1Q9NZU5 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.09□□□□□ -1.75
LMCD1Q9NZU5 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.09□□□□□ -1.75
LMCD1Q9NZU5 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LMCD1Q9NZU5 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LMCD1Q9NZU5 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.09□□□□□ -1.76
LMCD1Q9NZU5 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LMCD1Q9NZU5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LMCD1Q9NZU5 AC135776.4-201ENST00000624300 1904 ntBASIC4.09□□□□□ -1.76
LMCD1Q9NZU5 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.09□□□□□ -1.76
LMCD1Q9NZU5 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LMCD1Q9NZU5 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LMCD1Q9NZU5 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 RNU6-879P-201ENST00000364328 108 ntBASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 RNU6-336P-201ENST00000364891 107 ntBASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 SNORD63-201ENST00000384262 68 ntBASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 CYCSP4-201ENST00000429682 331 ntBASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 AL365440.1-201ENST00000436135 2167 ntBASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 AC083863.1-201ENST00000438811 231 ntBASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 AC016700.2-201ENST00000446011 156 ntBASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 FABP5P15-201ENST00000453566 214 ntBASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 AC016925.1-201ENST00000458303 298 ntBASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 snoU13.30-201ENST00000458951 104 ntBASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 RPL21P13-201ENST00000488305 481 ntBASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 FAM60BP-201ENST00000578364 658 ntBASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 MIR4308-201ENST00000580634 81 ntBASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 AC010928.2-201ENST00000588017 287 ntBASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LMCD1Q9NZU5 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 AC233981.2-201ENST00000611524 1614 ntBASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 Y_RNA.127-201ENST00000363386 109 ntBASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 Y_RNA.215-201ENST00000364204 112 ntBASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 RNU6-923P-201ENST00000364753 107 ntBASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 RNU6-326P-201ENST00000365480 107 ntBASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 RNU6-843P-201ENST00000384454 104 ntBASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 Y_RNA.500-201ENST00000384466 111 ntBASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 Y_RNA.504-201ENST00000384481 104 ntBASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 Y_RNA.569-201ENST00000384749 103 ntBASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 MIR124-3-201ENST00000384866 87 ntBASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 MIR199A2-201ENST00000385289 110 ntBASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 SNORA3C-201ENST00000408792 125 ntBASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 RPL23AP62-201ENST00000463396 453 ntBASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 SNORA31.19-201ENST00000517079 126 ntBASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 AL359881.1-201ENST00000602916 267 ntBASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 AC037487.3-201ENST00000606668 112 ntBASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.07□□□□□ -1.76
LMCD1Q9NZU5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms