Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 RNA5SP219-201ENST00000390940 113 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 RN7SKP32-201ENST00000410167 303 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 RNU2-48P-201ENST00000410694 191 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 RNA5SP489-201ENST00000410986 109 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 HMGN2P38-201ENST00000423806 265 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 RPL7P54-201ENST00000438336 674 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 AC087884.1-201ENST00000469738 328 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 AC107032.1-201ENST00000485945 480 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 AK3P2-201ENST00000507976 429 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 MTND3P5-201ENST00000512798 333 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 RNU5F-2P-201ENST00000516066 82 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 AC107953.1-201ENST00000522216 297 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 AC022616.8-201ENST00000533569 253 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 AC026271.5-201ENST00000577873 130 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 MIR4529-201ENST00000578110 78 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 SNRPGP17-201ENST00000603780 214 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 AC104073.3-201ENST00000610942 955 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 AL158209.2-201ENST00000619266 216 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 YWHAEP7-203ENST00000622054 312 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 OR5AK4P-201ENST00000635912 903 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 AC241585.2-209ENST00000638217 143 ntBASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CCL28Q9NRJ3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 RNU6-1141P-201ENST00000364520 107 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 SNORA16B-201ENST00000364674 135 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 Y_RNA.409-201ENST00000383990 98 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 RNU6-43P-201ENST00000384302 107 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 SNORA67.3-201ENST00000384366 140 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 SNORD37.1-201ENST00000390968 65 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 MTCO3P40-201ENST00000392516 676 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 HMGN2P39-201ENST00000398005 273 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 AL590556.1-201ENST00000423231 483 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 SNAP23P1-201ENST00000433229 246 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 AL121601.2-201ENST00000438019 707 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 RPL32P28-201ENST00000443577 397 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 MTCO3P38-201ENST00000468910 766 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 AC055731.1-201ENST00000474387 401 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 HMGB1P35-201ENST00000503360 598 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 RNU2-19P-201ENST00000517288 84 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 AC103996.1-201ENST00000555468 102 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 ANP32BP3-201ENST00000559213 706 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 AC103987.3-201ENST00000582071 292 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 VN1R80P-201ENST00000597126 338 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 AL034555.1-201ENST00000604816 211 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 AC018889.1-201ENST00000605372 397 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 RNU6-85P-201ENST00000605989 107 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 AC068792.1-201ENST00000621354 417 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 uc_338.20-201ENST00000621563 178 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 AL359880.1-201ENST00000621879 266 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 AP000560.1-201ENST00000624150 1937 ntBASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
CCL28Q9NRJ3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 RNU6-1085P-201ENST00000363576 107 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 RNU6-82P-201ENST00000363970 107 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 SNORA69-201ENST00000383895 132 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 RNU6-611P-201ENST00000384276 104 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 SNORA64-201ENST00000384674 134 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 AL355497.1-201ENST00000406262 551 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 RNU2-20P-201ENST00000410425 191 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 Y_RNA.597-201ENST00000410463 100 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 EIF1AXP1-201ENST00000419267 435 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 AL137159.1-201ENST00000452808 512 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 RNU7-138P-201ENST00000459479 64 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 SRRM1P2-201ENST00000464531 1192 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 RPL9P6-201ENST00000492764 598 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 AC107401.1-201ENST00000503426 685 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 AC022447.4-201ENST00000504053 364 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 RNA5SP401-201ENST00000515920 127 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 SNORA14.1-201ENST00000516113 141 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 RNU6-189P-201ENST00000516120 101 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 CENPUP1-201ENST00000526649 1202 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 MIR3136-201ENST00000583498 78 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 AC007229.1-201ENST00000590455 412 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 AC078899.2-201ENST00000595282 212 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 AL356157.2-201ENST00000605122 111 ntBASIC1.6□□□□□ -2.15
CCL28Q9NRJ3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms