Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX4Q9NQI0 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX4Q9NQI0 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.8□□□□□ -1.96
DDX4Q9NQI0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
DDX4Q9NQI0 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 RNU6-78P-201ENST00000362897 107 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 SNORD81.2-201ENST00000365153 76 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 RNU6-1329P-201ENST00000365664 107 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 SET-203ENST00000372688 801 ntTSL 2 BASIC2.79□□□□□ -1.96
DDX4Q9NQI0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
DDX4Q9NQI0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
DDX4Q9NQI0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
DDX4Q9NQI0 RNU2-49P-201ENST00000410666 184 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 HMGN2P35-201ENST00000412164 270 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 PDCL2P1-201ENST00000419302 352 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 PTGES3P4-201ENST00000426243 356 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 AL356320.1-201ENST00000429616 163 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 RPS15AP10-201ENST00000432472 382 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.79□□□□□ -1.96
DDX4Q9NQI0 AL441985.1-201ENST00000457727 251 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 RPL7P43-201ENST00000478876 753 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 RPL23AP49-201ENST00000492925 468 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.79□□□□□ -1.96
DDX4Q9NQI0 AC091951.2-201ENST00000500762 203 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.79□□□□□ -1.96
DDX4Q9NQI0 AC008526.1-201ENST00000509149 338 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 RNU6-1332P-201ENST00000516666 104 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 SNORA31.18-201ENST00000517043 134 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 AP005597.4-201ENST00000526762 229 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 AC026371.1-201ENST00000551867 419 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.79□□□□□ -1.96
DDX4Q9NQI0 MIR3672-201ENST00000584290 82 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 AL627309.6-201ENST00000606857 840 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 AC067747.1-201ENST00000608026 250 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.79□□□□□ -1.96
DDX4Q9NQI0 MIR6733-201ENST00000635723 61 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 U4.7-201ENST00000638126 106 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 AC010889.1-201ENST00000566193 2666 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 HAUS6P2-201ENST00000433254 2404 ntBASIC2.79□□□□□ -1.96
DDX4Q9NQI0 AC138393.1-203ENST00000327086 343 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 RNU6-562P-201ENST00000362731 107 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 RNU6-942P-201ENST00000363002 107 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 Y_RNA.142-201ENST00000363491 102 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 Y_RNA.301-201ENST00000364990 103 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
DDX4Q9NQI0 SNORD116-11-201ENST00000383882 92 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 RNU6-748P-201ENST00000384648 107 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 RNU6-19P-201ENST00000384718 107 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 AL079342.1-201ENST00000401460 267 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 AL135786.1-201ENST00000415892 214 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 AC093019.1-201ENST00000443135 252 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 AC124916.1-201ENST00000444020 547 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX4Q9NQI0 AL353705.4-201ENST00000449661 238 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 AC013470.1-201ENST00000453438 462 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX4Q9NQI0 MRPL42P6-201ENST00000486397 371 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.78□□□□□ -1.96
DDX4Q9NQI0 SNORA43.2-201ENST00000516652 128 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 RNU6-566P-201ENST00000516790 107 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 AC010186.2-204ENST00000537668 439 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 CR383656.8-201ENST00000549046 145 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 SCOCP1-201ENST00000554676 349 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 MIR1273D-201ENST00000577266 86 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 MIR5194-201ENST00000582634 120 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.78□□□□□ -1.96
DDX4Q9NQI0 AC099654.5-201ENST00000636479 350 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 MIR3529-201ENST00000637713 78 ntBASIC2.78□□□□□ -1.96
DDX4Q9NQI0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.78□□□□□ -1.96
DDX4Q9NQI0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.77□□□□□ -1.97
DDX4Q9NQI0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
DDX4Q9NQI0 SNORA41-201ENST00000384675 132 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 MT-TD-201ENST00000387419 68 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 AL117339.3-201ENST00000418733 162 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 AL645568.3-201ENST00000433683 316 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 HMGB1P18-201ENST00000438801 619 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 RPS15AP7-201ENST00000439294 405 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 AL031274.1-201ENST00000450334 232 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 AC012308.1-201ENST00000451232 178 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 AMD1P1-201ENST00000457220 922 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 AC107626.1-201ENST00000471084 183 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.77□□□□□ -1.97
DDX4Q9NQI0 AC096745.1-201ENST00000509945 370 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.77□□□□□ -1.97
DDX4Q9NQI0 RPL39P5-202ENST00000512505 151 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 RNU6-377P-201ENST00000515965 102 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 RNU6-581P-201ENST00000516214 105 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 ACA59.2-201ENST00000517061 156 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.77□□□□□ -1.97
DDX4Q9NQI0 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 AC090616.3-201ENST00000582184 217 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 MIR3117-201ENST00000584034 78 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 AC091135.1-201ENST00000585943 307 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 VN1R107P-201ENST00000601784 209 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 LARP7P1-201ENST00000605576 316 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.77□□□□□ -1.97
DDX4Q9NQI0 uc_338.15-201ENST00000615470 191 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 AC010378.1-201ENST00000619270 362 ntBASIC2.77□□□□□ -1.97
DDX4Q9NQI0 AL359757.2-201ENST00000624309 274 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms