Protein–RNA interactions for Protein: Q9NQ50

MRPL40, 39S ribosomal protein L40, mitochondrial, humanhuman

Known RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40Q9NQ50 COX6CP6-201ENST00000490840 228 ntBASIC0.53□□□□□ -2.32
MRPL40Q9NQ50 AC090142.3-201ENST00000519012 385 ntBASIC0.53□□□□□ -2.32
MRPL40Q9NQ50 AC090330.1-201ENST00000588646 764 ntBASIC0.53□□□□□ -2.32
MRPL40Q9NQ50 BNIP3P9-201ENST00000603714 553 ntBASIC0.53□□□□□ -2.32
MRPL40Q9NQ50 AL356094.1-201ENST00000624663 1212 ntBASIC0.53□□□□□ -2.32
MRPL40Q9NQ50 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
MRPL40Q9NQ50 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
MRPL40Q9NQ50 SNORA63D-201ENST00000364359 132 ntBASIC0.52□□□□□ -2.33
MRPL40Q9NQ50 RNA5SP390-201ENST00000410191 113 ntBASIC0.52□□□□□ -2.33
MRPL40Q9NQ50 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.52□□□□□ -2.33
MRPL40Q9NQ50 RNU6-583P-201ENST00000516012 92 ntBASIC0.52□□□□□ -2.33
MRPL40Q9NQ50 RNA5SP330-201ENST00000517096 96 ntBASIC0.52□□□□□ -2.33
MRPL40Q9NQ50 SUMO2P18-201ENST00000518873 252 ntBASIC0.52□□□□□ -2.33
MRPL40Q9NQ50 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.52□□□□□ -2.33
MRPL40Q9NQ50 AC009229.3-201ENST00000608056 282 ntBASIC0.52□□□□□ -2.33
MRPL40Q9NQ50 AC068647.2-201ENST00000637380 353 ntBASIC0.52□□□□□ -2.33
MRPL40Q9NQ50 ELL2P3-201ENST00000457883 1602 ntBASIC0.52□□□□□ -2.33
MRPL40Q9NQ50 RNU6-883P-201ENST00000384597 107 ntBASIC0.51□□□□□ -2.33
MRPL40Q9NQ50 MIR301A-201ENST00000385261 86 ntBASIC0.51□□□□□ -2.33
MRPL40Q9NQ50 SNORD65.1-201ENST00000390889 71 ntBASIC0.51□□□□□ -2.33
MRPL40Q9NQ50 RNU6-1176P-201ENST00000390955 107 ntBASIC0.51□□□□□ -2.33
MRPL40Q9NQ50 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.51□□□□□ -2.33
MRPL40Q9NQ50 AC083875.1-201ENST00000419509 405 ntBASIC0.51□□□□□ -2.33
MRPL40Q9NQ50 AL358176.2-201ENST00000425769 204 ntBASIC0.51□□□□□ -2.33
MRPL40Q9NQ50 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.51□□□□□ -2.33
MRPL40Q9NQ50 AL606517.1-201ENST00000446914 387 ntBASIC0.51□□□□□ -2.33
MRPL40Q9NQ50 HMGB1P30-201ENST00000492455 606 ntBASIC0.51□□□□□ -2.33
MRPL40Q9NQ50 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.51□□□□□ -2.33
MRPL40Q9NQ50 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC0.51□□□□□ -2.33
MRPL40Q9NQ50 AC078795.2-201ENST00000602835 1252 ntBASIC0.51□□□□□ -2.33
MRPL40Q9NQ50 AC016911.1-201ENST00000613297 452 ntBASIC0.51□□□□□ -2.33
MRPL40Q9NQ50 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.51□□□□□ -2.33
MRPL40Q9NQ50 AL079343.1-201ENST00000572358 1771 ntBASIC0.5□□□□□ -2.33
MRPL40Q9NQ50 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.5□□□□□ -2.33
MRPL40Q9NQ50 RPS26P5-201ENST00000418544 335 ntBASIC0.5□□□□□ -2.33
MRPL40Q9NQ50 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.5□□□□□ -2.33
MRPL40Q9NQ50 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.5□□□□□ -2.33
MRPL40Q9NQ50 MTND1P30-201ENST00000441241 901 ntBASIC0.5□□□□□ -2.33
MRPL40Q9NQ50 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
MRPL40Q9NQ50 RNA5SP121-201ENST00000516537 101 ntBASIC0.5□□□□□ -2.33
MRPL40Q9NQ50 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.5□□□□□ -2.33
MRPL40Q9NQ50 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
MRPL40Q9NQ50 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.5□□□□□ -2.33
MRPL40Q9NQ50 AL590229.1-201ENST00000603497 542 ntBASIC0.5□□□□□ -2.33
MRPL40Q9NQ50 MIR8087-201ENST00000612745 78 ntBASIC0.5□□□□□ -2.33
MRPL40Q9NQ50 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.5□□□□□ -2.33
MRPL40Q9NQ50 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.5□□□□□ -2.33
MRPL40Q9NQ50 Y_RNA.258-201ENST00000364613 105 ntBASIC0.49□□□□□ -2.33
MRPL40Q9NQ50 Y_RNA.295-201ENST00000364918 102 ntBASIC0.49□□□□□ -2.33
MRPL40Q9NQ50 U6.112-201ENST00000384129 70 ntBASIC0.49□□□□□ -2.33
MRPL40Q9NQ50 RNU6-1122P-201ENST00000384449 107 ntBASIC0.49□□□□□ -2.33
MRPL40Q9NQ50 RNU6-817P-201ENST00000391083 104 ntBASIC0.49□□□□□ -2.33
MRPL40Q9NQ50 RPS3AP1-201ENST00000413190 320 ntBASIC0.49□□□□□ -2.33
MRPL40Q9NQ50 AC063976.4-201ENST00000421971 163 ntBASIC0.49□□□□□ -2.33
MRPL40Q9NQ50 MTND4LP7-201ENST00000431728 294 ntBASIC0.49□□□□□ -2.33
MRPL40Q9NQ50 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.49□□□□□ -2.33
MRPL40Q9NQ50 SNORD124-201ENST00000459577 104 ntBASIC0.49□□□□□ -2.33
MRPL40Q9NQ50 RPS27P22-201ENST00000478056 241 ntBASIC0.49□□□□□ -2.33
MRPL40Q9NQ50 BET1P1-201ENST00000482276 359 ntBASIC0.49□□□□□ -2.33
MRPL40Q9NQ50 HMGB1P28-201ENST00000507778 552 ntBASIC0.49□□□□□ -2.33
MRPL40Q9NQ50 RNA5SP168-201ENST00000516642 112 ntBASIC0.49□□□□□ -2.33
MRPL40Q9NQ50 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.49□□□□□ -2.33
MRPL40Q9NQ50 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.49□□□□□ -2.33
MRPL40Q9NQ50 AC022432.1-201ENST00000595739 310 ntBASIC0.49□□□□□ -2.33
MRPL40Q9NQ50 AL391001.1-201ENST00000602747 715 ntBASIC0.49□□□□□ -2.33
MRPL40Q9NQ50 AL031775.1-201ENST00000607014 887 ntBASIC0.49□□□□□ -2.33
MRPL40Q9NQ50 AC091925.1-201ENST00000623204 462 ntBASIC0.49□□□□□ -2.33
MRPL40Q9NQ50 MTND4P21-201ENST00000453886 1357 ntBASIC0.48□□□□□ -2.33
MRPL40Q9NQ50 snoU2_19.1-201ENST00000362361 80 ntBASIC0.48□□□□□ -2.33
MRPL40Q9NQ50 RNU6-1019P-201ENST00000364424 107 ntBASIC0.48□□□□□ -2.33
MRPL40Q9NQ50 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.48□□□□□ -2.33
MRPL40Q9NQ50 AC123900.1-201ENST00000420390 96 ntBASIC0.48□□□□□ -2.33
MRPL40Q9NQ50 AC114737.2-201ENST00000421583 173 ntBASIC0.48□□□□□ -2.33
MRPL40Q9NQ50 TXNL1P1-201ENST00000429528 554 ntBASIC0.48□□□□□ -2.33
MRPL40Q9NQ50 AC005094.1-201ENST00000440420 368 ntBASIC0.48□□□□□ -2.33
MRPL40Q9NQ50 RPS20P10-201ENST00000451209 253 ntBASIC0.48□□□□□ -2.33
MRPL40Q9NQ50 SNORA31.4-201ENST00000516049 129 ntBASIC0.48□□□□□ -2.33
MRPL40Q9NQ50 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
MRPL40Q9NQ50 RNU6-165P-201ENST00000517170 99 ntBASIC0.48□□□□□ -2.33
MRPL40Q9NQ50 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.48□□□□□ -2.33
MRPL40Q9NQ50 RNU6-87P-201ENST00000607561 108 ntBASIC0.48□□□□□ -2.33
MRPL40Q9NQ50 AC104465.1-201ENST00000611365 139 ntBASIC0.48□□□□□ -2.33
MRPL40Q9NQ50 AC243829.6-201ENST00000612652 106 ntBASIC0.48□□□□□ -2.33
MRPL40Q9NQ50 AP000676.3-201ENST00000623299 569 ntBASIC0.48□□□□□ -2.33
MRPL40Q9NQ50 AL391994.1-201ENST00000254724 282 ntBASIC0.47□□□□□ -2.33
MRPL40Q9NQ50 MIR330-201ENST00000362196 94 ntBASIC0.47□□□□□ -2.33
MRPL40Q9NQ50 RNU6-1284P-201ENST00000363701 100 ntBASIC0.47□□□□□ -2.33
MRPL40Q9NQ50 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.47□□□□□ -2.33
MRPL40Q9NQ50 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.47□□□□□ -2.33
MRPL40Q9NQ50 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.47□□□□□ -2.33
MRPL40Q9NQ50 MTND5P14-201ENST00000441481 1267 ntBASIC0.47□□□□□ -2.33
MRPL40Q9NQ50 snoU13.27-201ENST00000459278 104 ntBASIC0.47□□□□□ -2.33
MRPL40Q9NQ50 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.47□□□□□ -2.33
MRPL40Q9NQ50 AC009646.1-201ENST00000510455 318 ntBASIC0.47□□□□□ -2.33
MRPL40Q9NQ50 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.47□□□□□ -2.33
MRPL40Q9NQ50 AC007792.1-201ENST00000623023 402 ntBASIC0.47□□□□□ -2.33
MRPL40Q9NQ50 RNU6-212P-201ENST00000362642 104 ntBASIC0.46□□□□□ -2.34
MRPL40Q9NQ50 RNU4-79P-201ENST00000362764 141 ntBASIC0.46□□□□□ -2.34
MRPL40Q9NQ50 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
MRPL40Q9NQ50 RNU6-716P-201ENST00000365621 103 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 518.2 ms