Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.91□□□□□ -2.1
NXF3Q9H4D5 AC007229.1-201ENST00000590455 412 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 AC068792.1-201ENST00000621354 417 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 AL359880.1-201ENST00000621879 266 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 AC139792.2-201ENST00000624218 587 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 AC099654.12-201ENST00000639868 649 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.1
NXF3Q9H4D5 RNU6-552P-201ENST00000362869 119 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 RNU6-1322P-201ENST00000364309 107 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 RNU6-384P-201ENST00000364900 104 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 RNU6-715P-201ENST00000365204 103 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 RNU6-45P-201ENST00000384471 107 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 CALM2P3-201ENST00000400429 449 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 RN7SKP158-201ENST00000410453 326 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 RNU6-607P-201ENST00000411283 108 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 AL669831.1-202ENST00000428504 417 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.9□□□□□ -2.11
NXF3Q9H4D5 AL606489.2-201ENST00000433886 234 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.9□□□□□ -2.11
NXF3Q9H4D5 GTF2IP13-201ENST00000438487 386 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.9□□□□□ -2.11
NXF3Q9H4D5 AC073415.1-201ENST00000449240 153 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 AC092001.1-201ENST00000453012 261 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.9□□□□□ -2.11
NXF3Q9H4D5 SRRM1P2-201ENST00000464531 1192 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 AL163973.1-201ENST00000484753 577 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 AC011005.2-201ENST00000487324 359 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 AC019235.1-201ENST00000503847 207 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 MTCO3P9-201ENST00000506989 781 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 AC116655.1-201ENST00000508324 901 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 RNU6-581P-201ENST00000516214 105 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 SNORA31.25-201ENST00000517242 134 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 RNU2-19P-201ENST00000517288 84 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 AC092325.1-201ENST00000566449 554 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 MIR4255-201ENST00000579351 72 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.9□□□□□ -2.11
NXF3Q9H4D5 AC073539.2-201ENST00000597113 165 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 BNIP3P30-201ENST00000601184 574 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 RMST_4.1-201ENST00000616886 107 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 AL354950.2-201ENST00000617939 290 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 AC091932.3-201ENST00000624223 323 ntBASIC1.9□□□□□ -2.11
NXF3Q9H4D5 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
NXF3Q9H4D5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.9□□□□□ -2.11
NXF3Q9H4D5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.9□□□□□ -2.11
NXF3Q9H4D5 AC138393.1-203ENST00000327086 343 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 Y_RNA.140-201ENST00000363474 103 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 Y_RNA.255-201ENST00000364581 97 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 RNU6-1280P-201ENST00000365211 107 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
NXF3Q9H4D5 Y_RNA.409-201ENST00000383990 98 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 RNU1-148P-201ENST00000384472 162 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 RNU6-1127P-201ENST00000384580 107 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.89□□□□□ -2.11
NXF3Q9H4D5 RNU2-3P-201ENST00000410144 191 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.89□□□□□ -2.11
NXF3Q9H4D5 AC097463.2-201ENST00000421074 142 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 MTCYBP8-201ENST00000422855 651 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.89□□□□□ -2.11
NXF3Q9H4D5 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.89□□□□□ -2.11
NXF3Q9H4D5 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.89□□□□□ -2.11
NXF3Q9H4D5 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.89□□□□□ -2.11
NXF3Q9H4D5 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.89□□□□□ -2.11
NXF3Q9H4D5 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.89□□□□□ -2.11
NXF3Q9H4D5 SNRPFP3-201ENST00000457792 225 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 RNU6-261P-201ENST00000459506 102 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 AC083798.1-201ENST00000472671 131 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 MTND3P25-201ENST00000509243 135 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 AF213884.2-201ENST00000510417 903 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 AC074344.1-201ENST00000512823 224 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 RNU1-86P-201ENST00000516108 154 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 RNA5SP458-201ENST00000516188 119 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 RNU1-107P-201ENST00000516617 154 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 RNU6-1178P-201ENST00000516674 107 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 ACA59.2-201ENST00000517061 156 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 AC118273.2-201ENST00000532092 465 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 AL137161.1-201ENST00000532231 390 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 AC022880.1-201ENST00000534017 973 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.89□□□□□ -2.11
NXF3Q9H4D5 MTCO3P23-201ENST00000561363 289 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.89□□□□□ -2.11
NXF3Q9H4D5 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.89□□□□□ -2.11
NXF3Q9H4D5 MIR4419B-201ENST00000577260 68 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
NXF3Q9H4D5 AL096840.1-201ENST00000603287 93 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.89□□□□□ -2.11
NXF3Q9H4D5 MIR5739-201ENST00000619803 80 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 AC098657.3-201ENST00000620434 263 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 AC138627.2-201ENST00000624202 601 ntBASIC1.89□□□□□ -2.11
NXF3Q9H4D5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NXF3Q9H4D5 RNU6-1085P-201ENST00000363576 107 ntBASIC1.88□□□□□ -2.11
NXF3Q9H4D5 RNU6-72P-201ENST00000384285 79 ntBASIC1.88□□□□□ -2.11
NXF3Q9H4D5 RNU6-393P-201ENST00000384475 107 ntBASIC1.88□□□□□ -2.11
NXF3Q9H4D5 MIR10A-201ENST00000385043 110 ntBASIC1.88□□□□□ -2.11
NXF3Q9H4D5 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
NXF3Q9H4D5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.88□□□□□ -2.11
NXF3Q9H4D5 RNU2-40P-201ENST00000410833 196 ntBASIC1.88□□□□□ -2.11
NXF3Q9H4D5 AC016831.2-201ENST00000417179 352 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 378.3 ms