Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 AC137590.2-201ENST00000619709 240 ntBASIC3.76□□□□□ -1.81
CCDC113Q9H0I3 SCARNA4-201ENST00000629045 128 ntBASIC3.76□□□□□ -1.81
CCDC113Q9H0I3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC113Q9H0I3 ZNF72P-201ENST00000425869 1908 ntBASIC3.76□□□□□ -1.81
CCDC113Q9H0I3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 RNA5SP267-201ENST00000364893 126 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 Y_RNA.527-201ENST00000384573 102 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 MIR32-201ENST00000384965 70 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 SAR1AP2-201ENST00000392696 594 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 RNU6-985P-201ENST00000410182 104 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 AC114482.1-201ENST00000418010 247 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 AL358453.1-201ENST00000422522 250 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 AL358075.3-201ENST00000426289 226 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 Z82188.1-201ENST00000436709 154 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 AC087477.1-201ENST00000465747 340 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 AC091153.1-201ENST00000466297 402 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 RPL36AP48-201ENST00000485521 314 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 RNU6-475P-201ENST00000516073 104 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 RNU6-1137P-201ENST00000517073 99 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 AC012493.2-201ENST00000595083 291 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 AC136443.5-201ENST00000603741 370 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 AC007179.3-201ENST00000604976 235 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 RPL23AP88-201ENST00000605759 454 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 RMST_8.1-201ENST00000610287 165 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 AC092628.2-201ENST00000622492 339 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CCDC113Q9H0I3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 RNA5SP197-201ENST00000363357 119 ntBASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 RNU4-56P-201ENST00000364700 142 ntBASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 AL590135.1-201ENST00000422215 156 ntBASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 AC019205.3-201ENST00000424573 156 ntBASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 RPL21P40-201ENST00000428586 483 ntBASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 AL357552.1-201ENST00000445254 415 ntBASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 AC016700.2-201ENST00000446011 156 ntBASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 MTND5P22-201ENST00000458380 195 ntBASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 RPS4XP2-201ENST00000458402 793 ntBASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 AC112771.1-201ENST00000463581 102 ntBASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 TOMM22P6-201ENST00000465035 409 ntBASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 RPL22P13-201ENST00000493291 347 ntBASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 FCF1P8-201ENST00000510322 597 ntBASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 RAC1P5-201ENST00000512182 576 ntBASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 RNU6-764P-201ENST00000516396 105 ntBASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 TGIF1P1-201ENST00000558095 802 ntBASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 VN1R91P-201ENST00000594377 169 ntBASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 RMST_6.1-201ENST00000611980 203 ntBASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 AC087588.2-201ENST00000617667 426 ntBASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 MIR4272-201ENST00000635924 64 ntBASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CCDC113Q9H0I3 MTND5P27-201ENST00000428871 1720 ntBASIC3.73□□□□□ -1.81
CCDC113Q9H0I3 RNU6-1010P-201ENST00000362757 107 ntBASIC3.73□□□□□ -1.81
CCDC113Q9H0I3 SNORD14.1-201ENST00000365609 90 ntBASIC3.73□□□□□ -1.81
CCDC113Q9H0I3 RNU6-541P-201ENST00000384709 110 ntBASIC3.73□□□□□ -1.81
CCDC113Q9H0I3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC113Q9H0I3 MTCO3P19-201ENST00000415864 321 ntBASIC3.73□□□□□ -1.81
CCDC113Q9H0I3 AC005326.1-201ENST00000429197 123 ntBASIC3.73□□□□□ -1.81
CCDC113Q9H0I3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC113Q9H0I3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC113Q9H0I3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC113Q9H0I3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC113Q9H0I3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC113Q9H0I3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC113Q9H0I3 AC016727.2-201ENST00000603988 621 ntBASIC3.73□□□□□ -1.81
CCDC113Q9H0I3 SNORD58B-201ENST00000607313 66 ntBASIC3.73□□□□□ -1.81
CCDC113Q9H0I3 U2.1-201ENST00000618978 145 ntBASIC3.73□□□□□ -1.81
CCDC113Q9H0I3 AC091903.1-201ENST00000624322 454 ntBASIC3.73□□□□□ -1.81
CCDC113Q9H0I3 SNORA43.4-201ENST00000629559 138 ntBASIC3.73□□□□□ -1.81
CCDC113Q9H0I3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 AP000560.1-201ENST00000624150 1937 ntBASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 RNU6-1285P-201ENST00000363480 105 ntBASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 Y_RNA.358-201ENST00000365491 99 ntBASIC3.72□□□□□ -1.81
CCDC113Q9H0I3 Y_RNA.455-201ENST00000384230 98 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms