Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC009646.1-201ENST00000510455 318 ntBASIC0.88□□□□□ -2.27
TRIM4Q9C037 RNU6-914P-201ENST00000516749 109 ntBASIC0.88□□□□□ -2.27
TRIM4Q9C037 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.88□□□□□ -2.27
TRIM4Q9C037 MIR1273C-201ENST00000578669 77 ntBASIC0.88□□□□□ -2.27
TRIM4Q9C037 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.88□□□□□ -2.27
TRIM4Q9C037 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.88□□□□□ -2.27
TRIM4Q9C037 AC010487.4-201ENST00000637027 61 ntBASIC0.88□□□□□ -2.27
TRIM4Q9C037 AC068700.1-201ENST00000565862 3754 ntBASIC0.87□□□□□ -2.27
TRIM4Q9C037 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
TRIM4Q9C037 AC245060.5-201ENST00000610778 3293 ntBASIC0.87□□□□□ -2.27
TRIM4Q9C037 SNORD33-201ENST00000362761 85 ntBASIC0.87□□□□□ -2.27
TRIM4Q9C037 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.87□□□□□ -2.27
TRIM4Q9C037 MIR532-201ENST00000385025 91 ntBASIC0.87□□□□□ -2.27
TRIM4Q9C037 Y_RNA.578-201ENST00000390903 88 ntBASIC0.87□□□□□ -2.27
TRIM4Q9C037 RPL23AP32-201ENST00000395315 459 ntBASIC0.87□□□□□ -2.27
TRIM4Q9C037 MIR936-201ENST00000401264 98 ntBASIC0.87□□□□□ -2.27
TRIM4Q9C037 MRPL35P1-201ENST00000404272 572 ntBASIC0.87□□□□□ -2.27
TRIM4Q9C037 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.87□□□□□ -2.27
TRIM4Q9C037 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.87□□□□□ -2.27
TRIM4Q9C037 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.87□□□□□ -2.27
TRIM4Q9C037 OR2AQ1P-201ENST00000451972 200 ntBASIC0.87□□□□□ -2.27
TRIM4Q9C037 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.87□□□□□ -2.27
TRIM4Q9C037 snoU109.2-201ENST00000459316 135 ntBASIC0.87□□□□□ -2.27
TRIM4Q9C037 MTND1P16-201ENST00000465177 898 ntBASIC0.87□□□□□ -2.27
TRIM4Q9C037 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.87□□□□□ -2.27
TRIM4Q9C037 AC104806.1-201ENST00000508720 308 ntBASIC0.87□□□□□ -2.27
TRIM4Q9C037 AC022022.2-201ENST00000602989 360 ntBASIC0.87□□□□□ -2.27
TRIM4Q9C037 AC004492.1-201ENST00000607036 742 ntBASIC0.87□□□□□ -2.27
TRIM4Q9C037 AC091925.1-201ENST00000623204 462 ntBASIC0.87□□□□□ -2.27
TRIM4Q9C037 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
TRIM4Q9C037 AC121333.1-201ENST00000567488 2709 ntBASIC0.87□□□□□ -2.27
TRIM4Q9C037 AL589826.1-201ENST00000340697 249 ntBASIC0.86□□□□□ -2.27
TRIM4Q9C037 SNORD116-20-201ENST00000384529 92 ntBASIC0.86□□□□□ -2.27
TRIM4Q9C037 SNORA40.2-201ENST00000390847 128 ntBASIC0.86□□□□□ -2.27
TRIM4Q9C037 MIR320C1-201ENST00000408566 88 ntBASIC0.86□□□□□ -2.27
TRIM4Q9C037 MIR1197-201ENST00000408818 88 ntBASIC0.86□□□□□ -2.27
TRIM4Q9C037 AC069282.1-201ENST00000411911 526 ntBASIC0.86□□□□□ -2.27
TRIM4Q9C037 CYCSP33-201ENST00000414485 327 ntBASIC0.86□□□□□ -2.27
TRIM4Q9C037 EIF1P1-201ENST00000421436 341 ntBASIC0.86□□□□□ -2.27
TRIM4Q9C037 AL365338.1-201ENST00000422282 858 ntBASIC0.86□□□□□ -2.27
TRIM4Q9C037 C8orf59P1-201ENST00000429930 303 ntBASIC0.86□□□□□ -2.27
TRIM4Q9C037 HSPE1P9-201ENST00000440046 311 ntBASIC0.86□□□□□ -2.27
TRIM4Q9C037 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.86□□□□□ -2.27
TRIM4Q9C037 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.86□□□□□ -2.27
TRIM4Q9C037 AP003072.2-201ENST00000527756 676 ntBASIC0.86□□□□□ -2.27
TRIM4Q9C037 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
TRIM4Q9C037 AC136932.1-201ENST00000574771 208 ntBASIC0.86□□□□□ -2.27
TRIM4Q9C037 AC022893.3-201ENST00000607665 437 ntBASIC0.86□□□□□ -2.27
TRIM4Q9C037 MIR6857-201ENST00000613267 93 ntBASIC0.86□□□□□ -2.27
TRIM4Q9C037 AL158163.2-201ENST00000619110 700 ntBASIC0.86□□□□□ -2.27
TRIM4Q9C037 LINC02555-201ENST00000563933 1951 ntBASIC0.86□□□□□ -2.27
TRIM4Q9C037 OR4G2P-201ENST00000328113 903 ntBASIC0.85□□□□□ -2.27
TRIM4Q9C037 RNU5A-8P-201ENST00000364102 114 ntBASIC0.85□□□□□ -2.27
TRIM4Q9C037 SNORA29-201ENST00000384183 140 ntBASIC0.85□□□□□ -2.27
TRIM4Q9C037 RNU6-72P-201ENST00000384285 79 ntBASIC0.85□□□□□ -2.27
TRIM4Q9C037 RNU6-360P-201ENST00000390944 104 ntBASIC0.85□□□□□ -2.27
TRIM4Q9C037 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.85□□□□□ -2.27
TRIM4Q9C037 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.85□□□□□ -2.27
TRIM4Q9C037 FTH1P12-201ENST00000432137 551 ntBASIC0.85□□□□□ -2.27
TRIM4Q9C037 AC245047.4-201ENST00000433189 144 ntBASIC0.85□□□□□ -2.27
TRIM4Q9C037 RPL9P9-202ENST00000466501 579 ntBASIC0.85□□□□□ -2.27
TRIM4Q9C037 SUMO2P5-201ENST00000506790 245 ntBASIC0.85□□□□□ -2.27
TRIM4Q9C037 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.85□□□□□ -2.27
TRIM4Q9C037 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.85□□□□□ -2.27
TRIM4Q9C037 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.85□□□□□ -2.27
TRIM4Q9C037 MIR4653-201ENST00000585107 83 ntBASIC0.85□□□□□ -2.27
TRIM4Q9C037 AP003465.2-201ENST00000602571 373 ntBASIC0.85□□□□□ -2.27
TRIM4Q9C037 AC112220.3-201ENST00000605502 502 ntBASIC0.85□□□□□ -2.27
TRIM4Q9C037 AL365204.3-201ENST00000612448 685 ntBASIC0.85□□□□□ -2.27
TRIM4Q9C037 AC130324.3-201ENST00000614165 542 ntBASIC0.85□□□□□ -2.27
TRIM4Q9C037 AC068880.4-201ENST00000623082 495 ntBASIC0.85□□□□□ -2.27
TRIM4Q9C037 Y_RNA.294-201ENST00000364916 102 ntBASIC0.84□□□□□ -2.27
TRIM4Q9C037 RNU6-395P-201ENST00000365662 106 ntBASIC0.84□□□□□ -2.27
TRIM4Q9C037 MIR548B-201ENST00000385247 97 ntBASIC0.84□□□□□ -2.27
TRIM4Q9C037 RNA5SP390-201ENST00000410191 113 ntBASIC0.84□□□□□ -2.27
TRIM4Q9C037 RNA5SP127-201ENST00000411051 133 ntBASIC0.84□□□□□ -2.27
TRIM4Q9C037 USP9YP21-201ENST00000420603 432 ntBASIC0.84□□□□□ -2.27
TRIM4Q9C037 AC013410.2-201ENST00000422627 201 ntBASIC0.84□□□□□ -2.27
TRIM4Q9C037 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
TRIM4Q9C037 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
TRIM4Q9C037 AL139824.2-201ENST00000458731 1095 ntBASIC0.84□□□□□ -2.27
TRIM4Q9C037 RNA5SP269-201ENST00000459032 137 ntBASIC0.84□□□□□ -2.27
TRIM4Q9C037 RNU6-333P-201ENST00000459117 107 ntBASIC0.84□□□□□ -2.27
TRIM4Q9C037 AC097473.1-201ENST00000508142 408 ntBASIC0.84□□□□□ -2.27
TRIM4Q9C037 AC105313.1-201ENST00000509121 353 ntBASIC0.84□□□□□ -2.27
TRIM4Q9C037 SNORA3.4-201ENST00000515969 96 ntBASIC0.84□□□□□ -2.27
TRIM4Q9C037 RNU6-1028P-201ENST00000517164 93 ntBASIC0.84□□□□□ -2.27
TRIM4Q9C037 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.84□□□□□ -2.27
TRIM4Q9C037 AC133485.1-201ENST00000567176 124 ntBASIC0.84□□□□□ -2.27
TRIM4Q9C037 AC138907.6-201ENST00000568401 126 ntBASIC0.84□□□□□ -2.27
TRIM4Q9C037 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.84□□□□□ -2.27
TRIM4Q9C037 AP000654.2-201ENST00000605633 586 ntBASIC0.84□□□□□ -2.27
TRIM4Q9C037 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
TRIM4Q9C037 AC009033.1-201ENST00000624279 431 ntBASIC0.84□□□□□ -2.27
TRIM4Q9C037 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.84□□□□□ -2.28
TRIM4Q9C037 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
TRIM4Q9C037 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
TRIM4Q9C037 HSBP1P2-201ENST00000299671 229 ntBASIC0.83□□□□□ -2.28
TRIM4Q9C037 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
TRIM4Q9C037 MIR1305-201ENST00000408300 86 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms