Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SNORA75B-201ENST00000384053 137 ntBASIC1.13□□□□□ -2.23
UPF3BQ9BZI7 RNU6-296P-201ENST00000384608 107 ntBASIC1.13□□□□□ -2.23
UPF3BQ9BZI7 RNU6-1222P-201ENST00000384615 107 ntBASIC1.13□□□□□ -2.23
UPF3BQ9BZI7 AL357139.1-201ENST00000407792 426 ntBASIC1.13□□□□□ -2.23
UPF3BQ9BZI7 Y_RNA.597-201ENST00000410463 100 ntBASIC1.13□□□□□ -2.23
UPF3BQ9BZI7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.13□□□□□ -2.23
UPF3BQ9BZI7 RPS27P16-201ENST00000425758 201 ntBASIC1.13□□□□□ -2.23
UPF3BQ9BZI7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.13□□□□□ -2.23
UPF3BQ9BZI7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
UPF3BQ9BZI7 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.13□□□□□ -2.23
UPF3BQ9BZI7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.13□□□□□ -2.23
UPF3BQ9BZI7 AC068587.4-201ENST00000533893 186 ntBASIC1.13□□□□□ -2.23
UPF3BQ9BZI7 HSPE1P19-201ENST00000603327 295 ntBASIC1.13□□□□□ -2.23
UPF3BQ9BZI7 AC084824.5-201ENST00000612009 413 ntBASIC1.13□□□□□ -2.23
UPF3BQ9BZI7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.13□□□□□ -2.23
UPF3BQ9BZI7 Y_RNA.332-201ENST00000365271 113 ntBASIC1.12□□□□□ -2.23
UPF3BQ9BZI7 Y_RNA.433-201ENST00000384089 102 ntBASIC1.12□□□□□ -2.23
UPF3BQ9BZI7 RNU6-413P-201ENST00000384115 107 ntBASIC1.12□□□□□ -2.23
UPF3BQ9BZI7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.12□□□□□ -2.23
UPF3BQ9BZI7 MTCYBP5-201ENST00000423752 1135 ntBASIC1.12□□□□□ -2.23
UPF3BQ9BZI7 AL669831.1-202ENST00000428504 417 ntBASIC1.12□□□□□ -2.23
UPF3BQ9BZI7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.12□□□□□ -2.23
UPF3BQ9BZI7 TXNL1P1-201ENST00000429528 554 ntBASIC1.12□□□□□ -2.23
UPF3BQ9BZI7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.12□□□□□ -2.23
UPF3BQ9BZI7 RNU6-1092P-201ENST00000516955 87 ntBASIC1.12□□□□□ -2.23
UPF3BQ9BZI7 VN1R107P-201ENST00000601784 209 ntBASIC1.12□□□□□ -2.23
UPF3BQ9BZI7 AL136363.2-201ENST00000604173 851 ntBASIC1.12□□□□□ -2.23
UPF3BQ9BZI7 RNU6-1192P-201ENST00000612197 107 ntBASIC1.12□□□□□ -2.23
UPF3BQ9BZI7 RNU6-489P-201ENST00000618289 107 ntBASIC1.12□□□□□ -2.23
UPF3BQ9BZI7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.12□□□□□ -2.23
UPF3BQ9BZI7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 MIR373-201ENST00000362273 69 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 RNU6-511P-201ENST00000363496 107 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 SNORD116-20-201ENST00000384529 92 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 BTF3L4P1-201ENST00000413813 468 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 ELOCP17-201ENST00000414751 326 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 VPS26BP1-201ENST00000417155 755 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 ELOCP9-201ENST00000418624 239 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 EIF1P1-201ENST00000421436 341 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 RPS25P9-201ENST00000435591 252 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 AC093899.1-201ENST00000457984 376 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 OR2A41P-201ENST00000473586 105 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 AC079140.2-201ENST00000506193 142 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 AC108078.1-201ENST00000508073 725 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 AL356057.1-201ENST00000533798 831 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 AP000860.1-201ENST00000605250 559 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 MIR15A-201ENST00000607334 83 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 AC072039.2-201ENST00000608883 439 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 AC131235.4-201ENST00000609288 620 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 AL078604.3-201ENST00000615580 211 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 AL590240.4-201ENST00000616908 390 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 AC022513.1-201ENST00000624512 117 ntBASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
UPF3BQ9BZI7 LINC02555-201ENST00000563933 1951 ntBASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 SNORD3E-201ENST00000362899 217 ntBASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 RNU5E-6P-201ENST00000365574 115 ntBASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 RNU6-769P-201ENST00000384407 104 ntBASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 RNU6-1257P-201ENST00000384625 110 ntBASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 AL135790.2-201ENST00000437701 267 ntBASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 AL022238.1-201ENST00000442557 355 ntBASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 RPL9P9-202ENST00000466501 579 ntBASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 AC078795.2-201ENST00000602835 1252 ntBASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 BCRP9-201ENST00000605312 388 ntBASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 AC144521.1-201ENST00000607148 956 ntBASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 AL121895.2-201ENST00000619558 447 ntBASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 MIR924-201ENST00000638017 53 ntBASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
UPF3BQ9BZI7 snoU2_19.1-201ENST00000362361 80 ntBASIC1.09□□□□□ -2.23
UPF3BQ9BZI7 RNU6-212P-201ENST00000362642 104 ntBASIC1.09□□□□□ -2.23
UPF3BQ9BZI7 SNORD114-6-201ENST00000364393 72 ntBASIC1.09□□□□□ -2.23
UPF3BQ9BZI7 AL590556.1-201ENST00000423231 483 ntBASIC1.09□□□□□ -2.23
UPF3BQ9BZI7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.09□□□□□ -2.23
UPF3BQ9BZI7 RPL39P29-201ENST00000447779 157 ntBASIC1.09□□□□□ -2.23
UPF3BQ9BZI7 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.09□□□□□ -2.23
UPF3BQ9BZI7 AC119751.4-201ENST00000507498 357 ntBASIC1.09□□□□□ -2.23
UPF3BQ9BZI7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.09□□□□□ -2.23
UPF3BQ9BZI7 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.09□□□□□ -2.23
UPF3BQ9BZI7 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
UPF3BQ9BZI7 CBX3P8-201ENST00000532412 525 ntBASIC1.09□□□□□ -2.23
UPF3BQ9BZI7 AC130324.3-201ENST00000614165 542 ntBASIC1.09□□□□□ -2.23
UPF3BQ9BZI7 AC068205.3-201ENST00000636385 468 ntBASIC1.09□□□□□ -2.23
UPF3BQ9BZI7 Y_RNA.115-201ENST00000363272 98 ntBASIC1.08□□□□□ -2.24
UPF3BQ9BZI7 RNU6-190P-201ENST00000384154 102 ntBASIC1.08□□□□□ -2.24
UPF3BQ9BZI7 MIR532-201ENST00000385025 91 ntBASIC1.08□□□□□ -2.24
UPF3BQ9BZI7 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.08□□□□□ -2.24
UPF3BQ9BZI7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.08□□□□□ -2.24
UPF3BQ9BZI7 AC130509.1-201ENST00000464158 433 ntBASIC1.08□□□□□ -2.24
UPF3BQ9BZI7 MTND2P33-201ENST00000506452 1031 ntBASIC1.08□□□□□ -2.24
UPF3BQ9BZI7 RNU6-405P-201ENST00000516637 110 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms