Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC118273.1-201ENST00000525324 3006 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 RNU6-335P-201ENST00000364563 113 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 SNORD116-20-201ENST00000384529 92 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 SNORD20-201ENST00000384550 80 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 MIR554-201ENST00000384874 96 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 RNU6-1248P-201ENST00000391096 64 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 SNORA3C-201ENST00000408792 125 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 RPL23AP95-201ENST00000426806 265 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 TBCAP1-201ENST00000436520 327 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 AC010095.1-201ENST00000443543 144 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 snoU13.4-201ENST00000458916 104 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 snoU13.24-201ENST00000458998 104 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 RPS27AP9-201ENST00000477681 438 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 AC016632.1-201ENST00000503994 196 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 RNU6-191P-201ENST00000516295 94 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 RNU6-703P-201ENST00000516946 107 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 RNA5SP54-201ENST00000516951 92 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 AC055872.1-201ENST00000570978 278 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 MIR5685-201ENST00000579080 79 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 AC244505.7-201ENST00000599675 272 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 AC010999.1-201ENST00000611856 324 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 AC034229.5-201ENST00000624258 185 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 AC048347.1-201ENST00000624621 427 ntBASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.29□□□□□ -1.88
SSBP3Q9BWW4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 AC110491.1-201ENST00000562191 2010 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 SNORD56.1-201ENST00000362913 68 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 Y_RNA.75-201ENST00000362927 97 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 RNU4-80P-201ENST00000363200 141 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 SNORD115-8-201ENST00000363856 82 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 RNA5SP399-201ENST00000364003 117 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 RNU6-151P-201ENST00000364158 107 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 RNU4-84P-201ENST00000364200 139 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 SNORD115-38-201ENST00000365037 82 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 RNU1-140P-201ENST00000365040 165 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 RNU6-898P-201ENST00000365627 104 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 RNU6-140P-201ENST00000384566 108 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 MIR124-3-201ENST00000384866 87 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 U3.19-201ENST00000390893 196 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 RNU2-2P-201ENST00000410396 191 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 IFNA11P-201ENST00000446352 526 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 MTATP6P7-201ENST00000453315 681 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 RPL23AP14-201ENST00000468281 468 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 AC097462.2-201ENST00000504623 481 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 SNORA31.8-201ENST00000516327 108 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 SNORA70.16-201ENST00000516390 95 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 SNORD116-25-201ENST00000516517 92 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 HSPE1P4-201ENST00000550617 308 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 AC233702.2-202ENST00000562547 291 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 MIR5571-201ENST00000577998 113 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 SNRPGP15-201ENST00000600149 222 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 RNU2-4P-201ENST00000606190 192 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 U2.15-201ENST00000611544 191 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 U2.16-201ENST00000613119 191 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 U2.12-201ENST00000613778 191 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 U2.9-201ENST00000615427 191 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 U2.11-201ENST00000616345 191 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 U2.2-201ENST00000616535 191 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 U2.3-201ENST00000617785 191 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 U2.19-201ENST00000618602 191 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 RNU2-1-201ENST00000618664 191 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 U2.6-201ENST00000619225 191 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 U2.5-201ENST00000619465 191 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 Y_RNA.778-201ENST00000620203 90 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 U2.10-201ENST00000620268 191 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 AL354798.1-201ENST00000622505 329 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 AC100821.1-201ENST00000523153 2479 ntBASIC3.28□□□□□ -1.88
SSBP3Q9BWW4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 RNU6-942P-201ENST00000363002 107 ntBASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 Y_RNA.121-201ENST00000363309 113 ntBASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 Y_RNA.182-201ENST00000363880 111 ntBASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 U3.15-201ENST00000365398 212 ntBASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 MIR134-201ENST00000385258 73 ntBASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 BTF3P11-201ENST00000426582 477 ntBASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.27□□□□□ -1.89
SSBP3Q9BWW4 SEPT7P4-201ENST00000437076 306 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms