Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AP002453.2-201ENST00000533503 320 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 AC137800.2-201ENST00000574375 120 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 CLIC4P2-201ENST00000601934 717 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 SNRPGP17-201ENST00000603780 214 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 SEPT7P9-203ENST00000604116 343 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 AC087683.2-201ENST00000611384 326 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 AP001506.1-201ENST00000615444 211 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 RMST_4.1-201ENST00000616886 107 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 AC091304.6-201ENST00000619761 202 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 AC011155.2-201ENST00000623202 216 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 U6.114-201ENST00000636407 96 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 AC233981.2-201ENST00000611524 1614 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 ZNF702P-202ENST00000434269 1966 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 FARSBP1-201ENST00000435808 1778 ntBASIC1.83□□□□□ -2.12
RPAP1Q9BWH6 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RPAP1Q9BWH6 RNU6-212P-201ENST00000362642 104 ntBASIC1.82□□□□□ -2.12
RPAP1Q9BWH6 RNU4-21P-201ENST00000362802 126 ntBASIC1.82□□□□□ -2.12
RPAP1Q9BWH6 RNY1P14-201ENST00000384426 108 ntBASIC1.82□□□□□ -2.12
RPAP1Q9BWH6 RNU6-1274P-201ENST00000384557 107 ntBASIC1.82□□□□□ -2.12
RPAP1Q9BWH6 MIR518A2-201ENST00000384966 87 ntBASIC1.82□□□□□ -2.12
RPAP1Q9BWH6 MT-TH-201ENST00000387441 69 ntBASIC1.82□□□□□ -2.12
RPAP1Q9BWH6 RNU2-3P-201ENST00000410144 191 ntBASIC1.82□□□□□ -2.12
RPAP1Q9BWH6 AC079781.2-201ENST00000446424 169 ntBASIC1.82□□□□□ -2.12
RPAP1Q9BWH6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.82□□□□□ -2.12
RPAP1Q9BWH6 snoU13.14-201ENST00000459372 104 ntBASIC1.82□□□□□ -2.12
RPAP1Q9BWH6 MTCYBP40-201ENST00000509390 1135 ntBASIC1.82□□□□□ -2.12
RPAP1Q9BWH6 RNU6-410P-201ENST00000517006 107 ntBASIC1.82□□□□□ -2.12
RPAP1Q9BWH6 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.82□□□□□ -2.12
RPAP1Q9BWH6 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.82□□□□□ -2.12
RPAP1Q9BWH6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.82□□□□□ -2.12
RPAP1Q9BWH6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RPAP1Q9BWH6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 RNA5SP276-201ENST00000362580 94 ntBASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 SNORA7.1-201ENST00000363750 139 ntBASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 RNU6-997P-201ENST00000384725 107 ntBASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 SNORA40.19-201ENST00000390846 128 ntBASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 RNU2-32P-201ENST00000411193 191 ntBASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 RNU6-607P-201ENST00000411283 108 ntBASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 OR9R1P-201ENST00000412200 877 ntBASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 GPR143P-201ENST00000434155 205 ntBASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 AL445567.1-201ENST00000439121 144 ntBASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 SNORD42A-201ENST00000459584 64 ntBASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 AC006512.1-201ENST00000468816 291 ntBASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 AC104136.1-201ENST00000512969 394 ntBASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 CYCSP27-201ENST00000527643 293 ntBASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 AC015720.1-201ENST00000565251 277 ntBASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 RMST_6.1-201ENST00000611980 203 ntBASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 AL603755.1-201ENST00000619504 163 ntBASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 AL159153.1-201ENST00000619688 317 ntBASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 AP000648.3-201ENST00000623539 4507 ntBASIC1.81□□□□□ -2.12
RPAP1Q9BWH6 RNU6-78P-201ENST00000362897 107 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 RNU6-1287P-201ENST00000362914 107 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 RNU4-42P-201ENST00000364738 142 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 Y_RNA.367-201ENST00000365544 101 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 RNU6-546P-201ENST00000383991 107 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 RNU6-74P-201ENST00000384235 107 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 RNU6-1060P-201ENST00000384664 107 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 AL512604.1-201ENST00000404812 257 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 CYCSP33-201ENST00000414485 327 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 MTND3P17-201ENST00000416968 344 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 MTND2P18-201ENST00000419962 1030 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 AL022238.1-201ENST00000442557 355 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 RPL23AP3-201ENST00000453844 468 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 AL353752.1-201ENST00000454946 260 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 AC074344.1-201ENST00000512823 224 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 AP003392.2-201ENST00000527269 208 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 AP003072.2-201ENST00000527756 676 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 AP000763.2-201ENST00000540641 163 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 MIR4775-201ENST00000581168 75 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 MIR98-201ENST00000606724 119 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 Z82243.1-201ENST00000609432 473 ntBASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RPAP1Q9BWH6 Y_RNA.191-201ENST00000363972 113 ntBASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 SNORA62.1-201ENST00000364287 154 ntBASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 RNU5E-7P-201ENST00000365290 117 ntBASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 RNU6-45P-201ENST00000384471 107 ntBASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 RNU6-297P-201ENST00000384636 107 ntBASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 RNU6-550P-201ENST00000391057 101 ntBASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 RNA5SP450-201ENST00000411206 102 ntBASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 AL513185.2-201ENST00000425543 193 ntBASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 RPL31P35-201ENST00000431058 377 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms