Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
NDC1Q9BTX1 AF127577.6-201ENST00000623352 2191 ntBASIC3.31□□□□□ -1.88
NDC1Q9BTX1 RNU6-858P-201ENST00000362436 107 ntBASIC3.31□□□□□ -1.88
NDC1Q9BTX1 Y_RNA.60-201ENST00000362831 98 ntBASIC3.31□□□□□ -1.88
NDC1Q9BTX1 Y_RNA.477-201ENST00000384352 108 ntBASIC3.31□□□□□ -1.88
NDC1Q9BTX1 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.31□□□□□ -1.88
NDC1Q9BTX1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.31□□□□□ -1.88
NDC1Q9BTX1 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.31□□□□□ -1.88
NDC1Q9BTX1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.31□□□□□ -1.88
NDC1Q9BTX1 Z82188.1-201ENST00000436709 154 ntBASIC3.31□□□□□ -1.88
NDC1Q9BTX1 CYCSP32-201ENST00000440548 321 ntBASIC3.31□□□□□ -1.88
NDC1Q9BTX1 U8.22-201ENST00000459141 133 ntBASIC3.31□□□□□ -1.88
NDC1Q9BTX1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.31□□□□□ -1.88
NDC1Q9BTX1 AC098869.1-201ENST00000481627 292 ntBASIC3.31□□□□□ -1.88
NDC1Q9BTX1 AC025465.3-201ENST00000510570 311 ntBASIC3.31□□□□□ -1.88
NDC1Q9BTX1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.31□□□□□ -1.88
NDC1Q9BTX1 MRPS36P4-201ENST00000534436 298 ntBASIC3.31□□□□□ -1.88
NDC1Q9BTX1 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.31□□□□□ -1.88
NDC1Q9BTX1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.31□□□□□ -1.88
NDC1Q9BTX1 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.31□□□□□ -1.88
NDC1Q9BTX1 AL138880.2-201ENST00000616214 239 ntBASIC3.31□□□□□ -1.88
NDC1Q9BTX1 AC024581.2-201ENST00000619986 252 ntBASIC3.31□□□□□ -1.88
NDC1Q9BTX1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NDC1Q9BTX1 MFSD8-233ENST00000641482 4860 ntBASIC3.31□□□□□ -1.88
NDC1Q9BTX1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NDC1Q9BTX1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
NDC1Q9BTX1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.31□□□□□ -1.88
NDC1Q9BTX1 AC233981.2-201ENST00000611524 1614 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NDC1Q9BTX1 AP001148.1-201ENST00000624124 2359 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 RNA5SP42-201ENST00000364278 115 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 RNA5SP267-201ENST00000364893 126 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 Y_RNA.562-201ENST00000384695 113 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 SNORD17-201ENST00000390930 237 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 AP000567.1-201ENST00000406413 156 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 FTH1P15-201ENST00000406984 280 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 AC243964.1-201ENST00000441814 261 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 BX510359.1-201ENST00000456973 237 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 TOMM22P6-201ENST00000465035 409 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 RPL39P38-201ENST00000467018 153 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 RN7SL601P-201ENST00000471221 293 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 TRBVB-201ENST00000477100 408 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 MRPL42P6-201ENST00000486397 371 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 FCF1P8-201ENST00000510322 597 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 AC067942.3-201ENST00000512025 362 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 RNU6-1023P-201ENST00000516137 106 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 RNU6-581P-201ENST00000516214 105 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.3□□□□□ -1.88
NDC1Q9BTX1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.3□□□□□ -1.88
NDC1Q9BTX1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.3□□□□□ -1.88
NDC1Q9BTX1 AC073410.2-201ENST00000603240 332 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 AL355877.2-201ENST00000603670 358 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 RMST_8.1-201ENST00000610287 165 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 AC068831.7-201ENST00000616954 363 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 MIR3199-2-201ENST00000636243 86 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 U6.92-201ENST00000636464 89 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.3□□□□□ -1.88
NDC1Q9BTX1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.3□□□□□ -1.88
NDC1Q9BTX1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NDC1Q9BTX1 AC073073.2-201ENST00000609827 2578 ntBASIC3.3□□□□□ -1.88
NDC1Q9BTX1 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.29□□□□□ -1.88
NDC1Q9BTX1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
NDC1Q9BTX1 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.29□□□□□ -1.88
NDC1Q9BTX1 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NDC1Q9BTX1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NDC1Q9BTX1 SNORD56.1-201ENST00000362913 68 ntBASIC3.29□□□□□ -1.88
NDC1Q9BTX1 RNU1-33P-201ENST00000364249 162 ntBASIC3.29□□□□□ -1.88
NDC1Q9BTX1 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.29□□□□□ -1.88
NDC1Q9BTX1 Y_RNA.518-201ENST00000384552 113 ntBASIC3.29□□□□□ -1.88
NDC1Q9BTX1 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NDC1Q9BTX1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NDC1Q9BTX1 RNU6-1093P-201ENST00000391194 107 ntBASIC3.29□□□□□ -1.88
NDC1Q9BTX1 AL358453.1-201ENST00000422522 250 ntBASIC3.29□□□□□ -1.88
NDC1Q9BTX1 AC005300.1-201ENST00000428401 373 ntBASIC3.29□□□□□ -1.88
NDC1Q9BTX1 RPL21P40-201ENST00000428586 483 ntBASIC3.29□□□□□ -1.88
NDC1Q9BTX1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.29□□□□□ -1.88
NDC1Q9BTX1 AC012308.1-201ENST00000451232 178 ntBASIC3.29□□□□□ -1.88
NDC1Q9BTX1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.29□□□□□ -1.88
NDC1Q9BTX1 MTND4LP30-201ENST00000454092 297 ntBASIC3.29□□□□□ -1.88
NDC1Q9BTX1 snoU13.30-201ENST00000458951 104 ntBASIC3.29□□□□□ -1.88
NDC1Q9BTX1 SNRPGP3-201ENST00000469405 227 ntBASIC3.29□□□□□ -1.88
NDC1Q9BTX1 ANXA2P1-201ENST00000505539 926 ntBASIC3.29□□□□□ -1.88
NDC1Q9BTX1 RNU6-1231P-201ENST00000517185 103 ntBASIC3.29□□□□□ -1.88
NDC1Q9BTX1 AP002770.2-201ENST00000543613 532 ntBASIC3.29□□□□□ -1.88
NDC1Q9BTX1 TGIF1P1-201ENST00000558095 802 ntBASIC3.29□□□□□ -1.88
NDC1Q9BTX1 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.29□□□□□ -1.88
NDC1Q9BTX1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.29□□□□□ -1.88
NDC1Q9BTX1 HMGN2P15-201ENST00000585707 270 ntBASIC3.29□□□□□ -1.88
NDC1Q9BTX1 AC010928.2-201ENST00000588017 287 ntBASIC3.29□□□□□ -1.88
NDC1Q9BTX1 SDR42E1P4-201ENST00000620894 481 ntBASIC3.29□□□□□ -1.88
NDC1Q9BTX1 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.29□□□□□ -1.88
NDC1Q9BTX1 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.29□□□□□ -1.88
NDC1Q9BTX1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.29□□□□□ -1.88
NDC1Q9BTX1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
NDC1Q9BTX1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NDC1Q9BTX1 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NDC1Q9BTX1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NDC1Q9BTX1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NDC1Q9BTX1 TNPO1P3-201ENST00000436471 2662 ntBASIC3.28□□□□□ -1.88
NDC1Q9BTX1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms