Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRFN3Q9BTN0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.44□□□□□ -1.86
LRFN3Q9BTN0 FAM35DP-201ENST00000323387 2712 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 RNU6-78P-201ENST00000362897 107 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 Y_RNA.314-201ENST00000365114 102 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 SNORD14.1-201ENST00000365609 90 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 RNU6-933P-201ENST00000384424 107 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 RNA5SP354-201ENST00000391247 136 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 MTND2P29-201ENST00000438595 412 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 AL161651.1-201ENST00000440882 223 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 AC108938.1-201ENST00000451204 136 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 U8.21-201ENST00000459536 136 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 AC008885.1-201ENST00000514930 301 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 Y_RNA.680-201ENST00000516441 93 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 SNORA43.2-201ENST00000516652 128 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 Y_RNA.715-201ENST00000517082 110 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 AC023157.2-201ENST00000540596 141 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 CR383656.8-201ENST00000549046 145 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 AC125232.2-201ENST00000592457 143 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 AC078899.3-201ENST00000599065 212 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 AC016727.2-201ENST00000603988 621 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 RNVU1-4-201ENST00000612985 164 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 MIR4272-201ENST00000635924 64 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 MIR3529-201ENST00000637713 78 ntBASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LRFN3Q9BTN0 AL356274.2-201ENST00000624379 3752 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 AC103988.1-201ENST00000566382 2177 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 HAUS6P2-201ENST00000433254 2404 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 AC007496.3-201ENST00000624987 3443 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 MIR423-201ENST00000362201 94 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 RNU6-799P-201ENST00000363567 107 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 RNU6-713P-201ENST00000384761 107 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 MIR767-201ENST00000390228 109 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 RNU6-1245P-201ENST00000411130 106 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 RNU2-64P-201ENST00000411315 191 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 AL117339.3-201ENST00000418733 162 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 BX276092.3-201ENST00000424182 230 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 AL365496.1-201ENST00000426885 215 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 AL591043.1-201ENST00000432461 424 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 AC073910.1-201ENST00000445047 438 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 AC013470.1-201ENST00000453438 462 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 RN7SL863P-201ENST00000462370 296 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 AC008571.1-201ENST00000467232 300 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 RN7SL585P-201ENST00000470538 280 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 AC006517.1-201ENST00000480485 328 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 RPL23AP49-201ENST00000492925 468 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 AC104576.1-201ENST00000524225 88 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 AL591516.1-201ENST00000611326 274 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 ZNF72P-201ENST00000425869 1908 ntBASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LRFN3Q9BTN0 MTND5P27-201ENST00000428871 1720 ntBASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 RNU6-527P-201ENST00000363425 104 ntBASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 Y_RNA.222-201ENST00000364264 102 ntBASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 RNU6-827P-201ENST00000365553 106 ntBASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 RNU6-209P-201ENST00000384118 107 ntBASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 Y_RNA.461-201ENST00000384263 103 ntBASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 SNORD73A-201ENST00000386062 65 ntBASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 MT-TW-201ENST00000387382 68 ntBASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 RNU6-750P-201ENST00000390946 107 ntBASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 RNU4-61P-201ENST00000411243 107 ntBASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 RHEBP3-201ENST00000411920 351 ntBASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 SNORD127-201ENST00000458892 86 ntBASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 RNU6-1132P-201ENST00000459214 107 ntBASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 RPL17P19-201ENST00000489069 552 ntBASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 AK3P2-201ENST00000507976 429 ntBASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 AC040926.1-201ENST00000530195 238 ntBASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 MIR5188-201ENST00000583467 113 ntBASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 AC012603.1-201ENST00000606424 528 ntBASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 HSPA8P1-201ENST00000425843 1833 ntBASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.41□□□□□ -1.86
LRFN3Q9BTN0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms